Transcript Information: S_Transcript_294640.p2


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value6E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.26746734909729
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.32148829623819
Replicate 20.11242134994837
Replicate 30.21422962417067
Condition 3: 24 Hour
Replicate 10.10977328387233
Replicate 20.11388850038366
Replicate 30.2534878834685


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_294640.p2 GENE.S_Transcript_294640~~S_Transcript_294640.p2 ORF type:complete len:199 (+),score=20.96,RVT_1|PF00078.23|1.5e-17 S_Transcript_294640:935-1531(+)
ATGCTAATTAAGGGGCATTTGTTGAAGGAAGGCATATTGTGCATAATATTATATTACTGCACGACATTACCAAGCATTACAAGCTGGAAAAATATTTCCCCAAGGTGCATCATGAAAATAGACCTTAAGAAAGCATATGATTCTATTAGCTGGAAGTTCCTAGAAGAGATGCTGAAGGATTTAAACTTCCCTGAGGGAGCAAAGGGCTTAAGACAAGGCGATCCACTCTTTCCTCTTCTTTTTGTGCTATGTATGGAATACTTATCTAGAGTCATGCAAGTAGTGGGGGAGTTAGGGGATTTCTCCTATCATCCTCTGTATAAAAAGATGGCCATTAATCACATCTGTTTTGCTGATAATTTGATCTTGTTTTGTAATGGGGATTACAAGTCTGTGAACATTATGCTGAGGGGTTTTAAAAACTTCTTTGAGACATCTGGATTAGAGATGAATAAAAAACAAGTCAGCTATGTATCTAAGTGGTATGGAGGAGCAGATGAAGGTGGGATTGAGCTAGCTGATAGGACTGCATATCGCTTCCCTCCCCTTTACTTACTTGGGTGTTCCAATTACATCCAAAAGATTAACTGTAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_294640.p2 GENE.S_Transcript_294640~~S_Transcript_294640.p2 ORF type:complete len:199 (+),score=20.96,RVT_1|PF00078.23|1.5e-17 S_Transcript_294640:935-1531(+)
MLIKGHLLKEGILCIILYYCTTLPSITSWKNISPRCIMKIDLKKAYDSISWKFLEEMLKDLNFPEGAKGLRQGDPLFPLLFVLCMEYLSRVMQVVGELGDFSYHPLYKKMAINHICFADNLILFCNGDYKSVNIMLRGFKNFFETSGLEMNKKQVSYVSKWYGGADEGGIELADRTAYRFPPLYLLGCSNYIQKINCS*

Click here to download the sequence:
Link to NCBI Protein BLAST