Transcript Information: S_Transcript_294657.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value3E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.43390762883446
Replicate 20.35971939495948
Replicate 30
Condition 2: 8 Hour
Replicate 10.2317977208384
Replicate 20.24317226782311
Replicate 30.23169399570632
Condition 3: 24 Hour
Replicate 10.23744438576733
Replicate 20.24634577800378
Replicate 30.68538164144337


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_294657.p1 GENE.S_Transcript_294657~~S_Transcript_294657.p1 ORF type:complete len:184 (+),score=11.80,zf-RVT|PF13966.2|4.6e-16 S_Transcript_294657:525-1076(+)
ATGTGGATCAGGTGGGTACATACCTACTTTATGAAAGGGAGAAATATTATGGAGGTACAAATTTCAGACAACCTGTCTTGGATGCTTAGAAGTATTCTGCTATGTAGAAGCTTGCTGAGTCAGATACAAAGCTCTATCAGGGGGTCAGAGGTAAATGTAAGGGAGGTTTATAAAGGTTTACTAGATGATTTTGATAAGATATCATGGAGGAATGTCTTTTGTAGAAATCCTGCAAGACCTAAAGCTATTATCTCTCTGTGGTTGCTACTTTGGAGGAGGCATTTCACCACTGACAGAATAGCTAGATGGGGGATCCAATGTGATAGCAAATGTATCATGTGCAAAAACAAAGAGGAATCACATGAACATCTCTTCCTAGAATGTACCTATACTCAGGAGGTGTGGAGAAATGTTCTCAGCTACCTTCATTTAGACAATCAGAATCAATGCAGACCCTCTGAATGGTCTGAAGGGGTGAAATGGCTGATCAATATGAGTAAGGGGAGATCTCCTACAGCAACACTTTTTAAAATGTGTTCTGCTGAGATCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_294657.p1 GENE.S_Transcript_294657~~S_Transcript_294657.p1 ORF type:complete len:184 (+),score=11.80,zf-RVT|PF13966.2|4.6e-16 S_Transcript_294657:525-1076(+)
MWIRWVHTYFMKGRNIMEVQISDNLSWMLRSILLCRSLLSQIQSSIRGSEVNVREVYKGLLDDFDKISWRNVFCRNPARPKAIISLWLLLWRRHFTTDRIARWGIQCDSKCIMCKNKEESHEHLFLECTYTQEVWRNVLSYLHLDNQNQCRPSEWSEGVKWLINMSKGRSPTATLFKMCSAEI*

Click here to download the sequence:
Link to NCBI Protein BLAST