Transcript Information: S_Transcript_294874.p1


Annotated TAIR IDAT1G05310.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:1550615-1552434 | Reverse length=393
E-Value2.6E-184
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.73925003431057
Replicate 20.33428469026538
Replicate 30.79173361975053
Condition 2: 8 Hour
Replicate 10.21540798300134
Replicate 20.62144023999241
Replicate 30.26913948996189
Condition 3: 24 Hour
Replicate 10.38614693038929
Replicate 20.80124586381026
Replicate 30.89168843856471


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_294874.p1 GENE.S_Transcript_294874~~S_Transcript_294874.p1 ORF type:complete len:396 (+),score=40.71,Pectinesterase|PF01095.15|7.9e-73 S_Transcript_294874:51-1238(+)
ATGATCAATATTAAAAATGCATGGCTCATATTGCTTATTCCCATTGTTTTGTCTTTGACATCAACACAAAATTCCTTAATATTCCTTAAAGACCTTAGCAAAATTAGCCTCCTTAGTACAAATTTTAACTCTCATCATCATCATGAGCACAACCACCATAAAGATGCAAAGAGAAAAGTGGACATATGTGAAGATTTTCCCCCAGATTTTCCTCCTCCAAATACTAACAGTACGTCAATCTTGTGTGTAGATAGAAATGGGTGTTGTAACTTCACTACAGTGCAATCCGCAGTTGATGCTGCTCCCGTTCTTAGCCAGAAAAGAATTGTTATATGGATTAACTCCGGTGTTTACTATGAAAAGGTGATGGTCCCAAGAAGCAAACCAAACATAACGTTTCAAGGACAAGGCTATGCATCAACTGCCATCGTGTGGAATGATACAGCTAACTCTTCCCATGGCACCTTCAACAGTGGCTCGGTTCAAGTTTTTGGTTCCAACTTCATTGCTAAAAATATTAGTTTTATGAATGTAGCTCCAATTGCTAGCCCTGGCGATGTTGGAGCACAAGCAGTGGCGATTAGAATAGGAGGAGATGAGGCTGCCTTCTGGGGCTGCGGCTTCTTTGGTGCTCAAGATACGCTTCACGATGACAGGGGTCGTCATTACTTTAGAGATTGCTACATCCAAGGTTCTATTGACTTCATTTTCGGTAATGGAAGATCCTTCTATGAGAATTGCCAGTTGATATCCATAGCAAGCCCAGTTCCAAGAGGACAAAAATACATAAATGGAGTGGTCACAGCAAGTGGGAGATCTTCCCAGGATGAGAACACTGGGTTTGTATTCTACAAGTCCACTATTGGAGGCACTGGAAGAATATGGTTGGGTCGTGCATGGCGTCCATTTTCTCGTGTAATTTATGCTTACTCCACAATGTCGGACATTATTGCTCCCGAGGGGTGGAATGATTTCAATAATCCAAATAACGACCAGACCATTTTCTACGGGGAATATATGTGCTCTGGACCAGGTGCAAATACGACAACAAGGGTGGCTTATGAGCAAAGGCTTAACGATACTCTTGTCGCTCCTTTCCTAAACCTTTCATTCATTGATGCGGATCAATGGCTTGAGCCTTACAAAACTAATCTTGTTTCTCTCTCCACTAAAATTAAATCATTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_294874.p1 GENE.S_Transcript_294874~~S_Transcript_294874.p1 ORF type:complete len:396 (+),score=40.71,Pectinesterase|PF01095.15|7.9e-73 S_Transcript_294874:51-1238(+)
MINIKNAWLILLIPIVLSLTSTQNSLIFLKDLSKISLLSTNFNSHHHHEHNHHKDAKRKVDICEDFPPDFPPPNTNSTSILCVDRNGCCNFTTVQSAVDAAPVLSQKRIVIWINSGVYYEKVMVPRSKPNITFQGQGYASTAIVWNDTANSSHGTFNSGSVQVFGSNFIAKNISFMNVAPIASPGDVGAQAVAIRIGGDEAAFWGCGFFGAQDTLHDDRGRHYFRDCYIQGSIDFIFGNGRSFYENCQLISIASPVPRGQKYINGVVTASGRSSQDENTGFVFYKSTIGGTGRIWLGRAWRPFSRVIYAYSTMSDIIAPEGWNDFNNPNNDQTIFYGEYMCSGPGANTTTRVAYEQRLNDTLVAPFLNLSFIDADQWLEPYKTNLVSLSTKIKSL*

Click here to download the sequence:
Link to NCBI Protein BLAST