Transcript Information: S_Transcript_294879.p2


Annotated TAIR IDAT1G05310.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:1550615-1552434 | Reverse length=393
E-Value2E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6048040945838
Replicate 20.44347315693497
Replicate 30.92677065746736
Condition 2: 8 Hour
Replicate 11.8217670120164
Replicate 21.4614775493289
Replicate 31.8209518054507
Condition 3: 24 Hour
Replicate 11.2075061225957
Replicate 20.91110800306924
Replicate 30.50697576693701


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_294879.p2 GENE.S_Transcript_294879~~S_Transcript_294879.p2 ORF type:complete len:199 (+),score=15.58,Pectinesterase|PF01095.15|5.9e-20 S_Transcript_294879:51-647(+)
ATGATCAATATTAAAAATGCATGGCTCATATTGCTTATTCCCATTGTTTTGTCTTTGACATCAACACAAAATTCCTTAATATTCCTTAAAGACCTTAGCAAAATTAGCCTCCTTAGTACAAATTTTAACTCTCATCATCATCATGAGCACAACCACCATAAAGATGCAAAGAGAAAAGTGGACATATGTGAAGATTTTCCCCCAGATTTTCCTCCTCCAAATACTAACAGTACGTCAATCTTGTGTGTAGATAGAAATGGGTGTTGTAACTTCACTACAGTGCAATCCGCAGTTGATGCTGCTCCCGTTCTTAGCCAGAAAAGAATTGTTATATGGATTAACTCCGGTGTTTACTATGAAAAGGTGATGGTCCCAAGAAGCAAACCAAACATAACGTTTCAAGGACAAGGCTATGCATCAACTGCCATCGTGTGGAATGATACAGCTAACTCTTCCCATGGCACCTTCAACAGTGGCTCGGTTCAAGTTTTTGGTTCCAACTTCATTGCTAAAAATATTACTCCCTCCGTCCTAAATTGTTCTTTACCCTTGTTTTTTGTGACTCACAACAATGTGAGTCACAAATGCCAAGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_294879.p2 GENE.S_Transcript_294879~~S_Transcript_294879.p2 ORF type:complete len:199 (+),score=15.58,Pectinesterase|PF01095.15|5.9e-20 S_Transcript_294879:51-647(+)
MINIKNAWLILLIPIVLSLTSTQNSLIFLKDLSKISLLSTNFNSHHHHEHNHHKDAKRKVDICEDFPPDFPPPNTNSTSILCVDRNGCCNFTTVQSAVDAAPVLSQKRIVIWINSGVYYEKVMVPRSKPNITFQGQGYASTAIVWNDTANSSHGTFNSGSVQVFGSNFIAKNITPSVLNCSLPLFFVTHNNVSHKCQG*

Click here to download the sequence:
Link to NCBI Protein BLAST