Transcript Information: S_Transcript_29500.p1


Annotated TAIR IDAT5G67530.1
Annotated Gene Nameplant U-box 49
Annotated Gene Symbol(s)ATPUB49, PUB49
Annotation TypeOrtholog
Chromosome Positionchr5:26941260-26943878 | Forward length=595
E-Value2E-170
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.66717830394603
Replicate 21.2291247664354
Replicate 30.56509776300726
Condition 2: 8 Hour
Replicate 11.5444572374525
Replicate 21.3709767968635
Replicate 31.1875124013917
Condition 3: 24 Hour
Replicate 11.3995329255812
Replicate 20.75756473235702
Replicate 30.98358947540843


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_29500.p1 GENE.S_Transcript_29500~~S_Transcript_29500.p1 ORF type:complete len:359 (+),score=82.25,Rtf2|PF04641.8|2.4e+03,Rtf2|PF04641.8|4.4e-06 S_Transcript_29500:476-1552(+)
ATGGGGAAGAAACAACATAGCAAAGATCGAATGTTCATAACCAAAACAGAATGGGCTACTGAATGGGGTGGTGCTAAGTCTAAATCTCTCCATACTCCCTTCAAACGCCTCCCTTTCTATTGCTGCGCTCTCACGTTCACGCCCTTTGACATTCCAGTTTGCACTCAGGATGGCTGCGTCTTTGATACCATGCATATTATACCTTACATCAGAAAGTATGGGAGGAACCCTGTTACTGGAGCTCCTCTTAAGCTTGGGGACCTTATTCCTCTTACTTTTCACAAGAACTCCGAAGGGGAATTTCATTGCCCTGTTTTGAACAAGGTTTTCACTGAATTTACCCACATAGTTGCTGTCAAGACCTCTGGGAATGTCTTCTGTTATGAGGCAATCAAAGAGTTGAACATTAAGACGAAGAACTGGAAGGAACTGCTCACAGACGAACCATTCACTAAAGATGATATCATAACAATTCAGAATCCTCATGATCTTGACACCAAAAAGGTTCTGGATGAATTTGATCACATCAAGAAAGGGTTGAAAGTGGATGATGAAGAACTGAAGAAAATGGAATCAGATCCAACTTATAACATTAATGTAACTGGGGATATCAAGCAGATGCTTGCAGAACTTGGAACTGAAAAGGCAAAACAAGCAGCATTGCTTGGAGGAGGTGGAAGCAAGGCACAGCAAGAAAGAGCTGCTGCACTTGAAGCTATTTTGGCTGCAAGATCACGAATTGACGAAAATTCTAAATCAAATGGAAAGACTGAAAATAGACAAGGGTATAGTATTGTGGATGCTGCGTCTGCCTCAGTACATGGACGAAGTGCTGCTGCGGCAAAATCTGCATCAGCTGAGAAAACTGCTGCTCGAATTGCTGCTCATATGGCTGGCGACAGAACTCCAGTGAACGCCAAGCTGGCAAAATACATGTTTTTCTTGGGGGATTATCAGTGCGTGCTTGGTGTAATGACCCGTCAACCTGTCCCTTTTTCATGCATCTGTGATGTTCAAGGTCAAGAGCCGTTTCACAACTGGTGCTGCTTCAAGATCCTTCACTTCCACTGCTTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_29500.p1 GENE.S_Transcript_29500~~S_Transcript_29500.p1 ORF type:complete len:359 (+),score=82.25,Rtf2|PF04641.8|2.4e+03,Rtf2|PF04641.8|4.4e-06 S_Transcript_29500:476-1552(+)
MGKKQHSKDRMFITKTEWATEWGGAKSKSLHTPFKRLPFYCCALTFTPFDIPVCTQDGCVFDTMHIIPYIRKYGRNPVTGAPLKLGDLIPLTFHKNSEGEFHCPVLNKVFTEFTHIVAVKTSGNVFCYEAIKELNIKTKNWKELLTDEPFTKDDIITIQNPHDLDTKKVLDEFDHIKKGLKVDDEELKKMESDPTYNINVTGDIKQMLAELGTEKAKQAALLGGGGSKAQQERAAALEAILAARSRIDENSKSNGKTENRQGYSIVDAASASVHGRSAAAAKSASAEKTAARIAAHMAGDRTPVNAKLAKYMFFLGDYQCVLGVMTRQPVPFSCICDVQGQEPFHNWCCFKILHFHCL*

Click here to download the sequence:
Link to NCBI Protein BLAST