Transcript Information: S_Transcript_295086.p1


Annotated TAIR IDAT3G62890.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:23246168-23247973 | Forward length=573
E-Value8.6E-268
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.5795125897108
Replicate 20.44347315693497
Replicate 30.46338532873368
Condition 2: 8 Hour
Replicate 11.464557793974
Replicate 21.199161066116
Replicate 31.6781320560036
Condition 3: 24 Hour
Replicate 10.36591094624111
Replicate 20.34166550115097
Replicate 30.42247980578084


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_295086.p1 GENE.S_Transcript_295086~~S_Transcript_295086.p1 ORF type:complete len:597 (+),score=91.19,PPR|PF01535.16|2.1e+02,PPR|PF01535.16|7.2e+02,PPR|PF01535.16|0.0018,PPR|PF01535.16|9.1e-06,PPR|PF01535.16|5.5e-09,PPR|PF01535.16|8.4e+02,PPR|PF01535.16|0.014,PPR|PF01535.16|9.3e-06,PPR|PF01535.16|23,PPR|PF01535.16|0.15,PPR|PF01535.16|8.5e+02,PPR|PF01535.16|10,PPR|PF01535.16|3.5e+03,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|0.00019,PPR_2|PF13041.2|5.5e-12,PPR_2|PF13041.2|5.1,PPR_2|PF13041.2|1e-08,PPR_2|PF13041.2|7.6,PPR_2|PF13041.2|2.4e+03,DYW_deaminase|PF14432.2|8.1e-40,PPR_3|PF13812.2|23,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.33,PPR_3|PF13812.2|0.0002,PPR_3|PF13812.2|0.078,PPR_3|PF13812.2|0.84,PPR_3|PF13812.2|1.6e+03,PPR_3|PF13812.2|3.1,PPR_3|PF13812.2|1.2,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|0.063,PPR_1|PF12854.3|3.5e-05,PPR_1|PF12854.3|0.52,PPR_1|PF12854.3|50,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|0.22 S_Transcript_295086:218-2008(+)
ATGAAAACCTTGTGGGATACAGGAAGAGTAGTTAAATGTCAATCCATTTCCCCGCCATTTCACATAGGACATGAGATGAGAGCTACACTAAAGCAGAATCTGATATCACCAACACATCCAAGTCTCCATCTTTCTCATTCAACCATTGAATCTTTCATCTGGAACACCATTATTCGAGCTCATTCCCAATTCCCTTCTAGCATATCCTTCTCCCCAATATCTGTCTTTCTTCGCATGCGCCGTCATGGTGTCAAACCTGATTCCCATACTTTCCCATTCCTTCGACAATCCTTAAACTCTCCAACCCATCTCATTTTAGGCCAAAAGATTCATGCCCAGATTTTCCATTTTGGGTTTCAAAGCGATGCCTATGTGGGCACTTCTCTCATAAACACGTACTCTTCTTGTGGTGACTTGGGCCTTGCCCACCAATTGTTCGATGAAATGCCTGAACGAGACTTACCTTCTTGGAATTCCATTATTAATGCGAATGTTCAAGTGGGGTTGCTTAATAAAGCTAGGAAATTGTTTGATGGGATGAAAGAGAGGAATGTAATTACTTGGAGTTGTATGATTAATGGTTATGTAAAGTGGGGTGAGTATAAGGAAGCTCTTCAGCTGTTTAGAGATATGCAAGTTTTGGGTGTTGATAATGTTAGACCTAATGAATTCACAATGTCAGGTGTTCTTTCAGCTTGTGGGAGGTTAGGGGCTCTGGAACATGGGAAGTGGGCTCATGCTTATATTGACAAGAGTGGCATGAAAGTTGATGTTATTTTGGGAACTGCTTTGATTGATATGTATGCAAAATGTGGGAGCATCGAAAGGGCCAAGTGGGTGTTTGACCAATTGGGATCTAATAATGATGTTAAGGCTTGGAGTGTCATGATCTCAGGCTTAGCTATGCACGGACATGGTGAAGAATGTTTCCATTTATTCTCAAAGATGTTGAATCATGGTGTTGAGCCTAATGCGATCACATTTTTGGGTATCCTTTGTGCTTGTGTTCACTGCGGCTTGGTACCAGAAGGGGATAAGTATTTTGCAATGATGAACAAAGAATTTGATATTGCCCCTTCCATTCAACACTATGGCTGCATGGTTGACCTATACGGAAGGGCTGGTCTCATAGCGAAGGCATGGAATGTGGTCAAGTCAATGCCAATGGAACCTGATATCCTTATTTGGGGAGCCTTACTGAGTGGATCTAGAGTGCACGGGAATATTGAAACTTGTGAGCTAGCGCTTAGAAAACTAATTGAGCTAGAACCTTCAAATAGTGGAGCTCATGTGCTTCTTTCTAATGTTTATGCCAAGATGGGTAGGTGGAAAGATGTAAGGCATATTAGGGGTCTCATGGAAGCAAACGGAATAAAGAAGGTTCCTGGTTGTAGTTTGGTTGAAATTGGGGGTGCCGTTCATGAGTTTTCTGCTGGAGATGAGTCTCATCCTGAGACAAGAGAGATATACTTGATGGTACAAGAGATCATGAATCGATTGAGGATGGAAGGATACGTTGTAGACACCAAAGAAGTGTTGCTTGATTTAGATGAGGAAGCAAAAGAGATCTCCTTATCATTTCATAGTGAAAAATTAGCAGTTGCCTATGCCTTGTTGAAGACAAGTGCCGGCACCCCCATACGCATTGTCAAAAACCTTAGGATATGTGGTGACTGTCATGAAGCAATAAAGATTATTTCAAGGGTGTACAATCGAGAGATTATCGTTCGAGATTGCAACAGGTTCCATCACTTCAACCATGGTATATGCTCTTGTAAAGATTATTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_295086.p1 GENE.S_Transcript_295086~~S_Transcript_295086.p1 ORF type:complete len:597 (+),score=91.19,PPR|PF01535.16|2.1e+02,PPR|PF01535.16|7.2e+02,PPR|PF01535.16|0.0018,PPR|PF01535.16|9.1e-06,PPR|PF01535.16|5.5e-09,PPR|PF01535.16|8.4e+02,PPR|PF01535.16|0.014,PPR|PF01535.16|9.3e-06,PPR|PF01535.16|23,PPR|PF01535.16|0.15,PPR|PF01535.16|8.5e+02,PPR|PF01535.16|10,PPR|PF01535.16|3.5e+03,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|0.00019,PPR_2|PF13041.2|5.5e-12,PPR_2|PF13041.2|5.1,PPR_2|PF13041.2|1e-08,PPR_2|PF13041.2|7.6,PPR_2|PF13041.2|2.4e+03,DYW_deaminase|PF14432.2|8.1e-40,PPR_3|PF13812.2|23,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.33,PPR_3|PF13812.2|0.0002,PPR_3|PF13812.2|0.078,PPR_3|PF13812.2|0.84,PPR_3|PF13812.2|1.6e+03,PPR_3|PF13812.2|3.1,PPR_3|PF13812.2|1.2,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|1.6e+03,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|0.063,PPR_1|PF12854.3|3.5e-05,PPR_1|PF12854.3|0.52,PPR_1|PF12854.3|50,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|0.22 S_Transcript_295086:218-2008(+)
MKTLWDTGRVVKCQSISPPFHIGHEMRATLKQNLISPTHPSLHLSHSTIESFIWNTIIRAHSQFPSSISFSPISVFLRMRRHGVKPDSHTFPFLRQSLNSPTHLILGQKIHAQIFHFGFQSDAYVGTSLINTYSSCGDLGLAHQLFDEMPERDLPSWNSIINANVQVGLLNKARKLFDGMKERNVITWSCMINGYVKWGEYKEALQLFRDMQVLGVDNVRPNEFTMSGVLSACGRLGALEHGKWAHAYIDKSGMKVDVILGTALIDMYAKCGSIERAKWVFDQLGSNNDVKAWSVMISGLAMHGHGEECFHLFSKMLNHGVEPNAITFLGILCACVHCGLVPEGDKYFAMMNKEFDIAPSIQHYGCMVDLYGRAGLIAKAWNVVKSMPMEPDILIWGALLSGSRVHGNIETCELALRKLIELEPSNSGAHVLLSNVYAKMGRWKDVRHIRGLMEANGIKKVPGCSLVEIGGAVHEFSAGDESHPETREIYLMVQEIMNRLRMEGYVVDTKEVLLDLDEEAKEISLSFHSEKLAVAYALLKTSAGTPIRIVKNLRICGDCHEAIKIISRVYNREIIVRDCNRFHHFNHGICSCKDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST