Transcript Information: S_Transcript_295089.p1


Annotated TAIR IDAT3G62890.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:23246168-23247973 | Forward length=573
E-Value6E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.333023238604
Replicate 30.13919046100831
Condition 2: 8 Hour
Replicate 10.40236585504025
Replicate 20.84422070338591
Replicate 30.24131148232054
Condition 3: 24 Hour
Replicate 10.16486704521203
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_295089.p1 GENE.S_Transcript_295089~~S_Transcript_295089.p1 ORF type:complete len:265 (+),score=40.20,PPR_2|PF13041.2|0.044,PPR_2|PF13041.2|0.048,PPR_2|PF13041.2|7.8e-05,PPR_2|PF13041.2|1.7e-12,PPR_2|PF13041.2|8e+02,PPR|PF01535.16|82,PPR|PF01535.16|2.8e+02,PPR|PF01535.16|0.00053,PPR|PF01535.16|3.1e-06,PPR|PF01535.16|1.9e-09,PPR|PF01535.16|3.1e+02,PPR|PF01535.16|7e+02,PPR_3|PF13812.2|7.7,PPR_3|PF13812.2|0.89,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|6.6e-05,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|2.3e+03,PPR_1|PF12854.3|8.1e+02,PPR_1|PF12854.3|6.5e+02,PPR_1|PF12854.3|0.24,PPR_1|PF12854.3|0.022,PPR_1|PF12854.3|1.2e-05,PPR_1|PF12854.3|3.5e+03 S_Transcript_295089:303-1097(+)
ATGAGAGCTACACTAAAGCAGAATCTGATATCACCAACACATCCAAGTCTCCATCTTTCTCATTCAACCATTGAATCTTTCATCTGGAACACCATTATTCGAGCTCATTCCCAATTCCCTTCTAGCATATCCTTCTCCCCAATATCTGTCTTTCTTCGCATGCGCCGTCATGGTGTCAAACCTGATTCCCATACTTTCCCATTCCTTCGACAATCCTTAAACTCTCCAACCCATCTCATTTTAGGCCAAAAGATTCATGCCCAGATTCTCCAATTTGGGTTTCAAAGTGATGCCTATGTGGGCACATCTCTTATTAACATGTACTCTTCTAGTGGTGAATTGGGTCTTGCCCACCAAATGTTTGATGAAATGCCTGAACGAGACTTACCTTCTTGGAATTCCATTATTAATGCGAATGTTCAAGTGGGGTTGCTTAATAAAGCTAGGAAATTGTTTGATGGGATGAAAGAGAGGAATGTAATTACTTGGAGTTGTATGATTAATGGTTATGTAAAGTGGGGTGAGTATAAGGAAGCTCTTCAGCTGTTTAGAGATATGCAAGTTTTGGGTGTTGATAATGTTAGACCTAATGAATTCACAATGTCAGGTGTTCTTTCAGCTTGTGGGAGGTTAGGGGCTCTGGAACATGGGAAGTGGGCTCATGCTTATATTGACAAGAGTGGCATGAAAGTTGATGTTATTTTGGGAACTGCTTTGATTGATATGTATTCAAAATGTCAACTCAACTCAAAAAAAAAAAAAAAAAAAAATGTATTCAAAATGTGGGAGCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_295089.p1 GENE.S_Transcript_295089~~S_Transcript_295089.p1 ORF type:complete len:265 (+),score=40.20,PPR_2|PF13041.2|0.044,PPR_2|PF13041.2|0.048,PPR_2|PF13041.2|7.8e-05,PPR_2|PF13041.2|1.7e-12,PPR_2|PF13041.2|8e+02,PPR|PF01535.16|82,PPR|PF01535.16|2.8e+02,PPR|PF01535.16|0.00053,PPR|PF01535.16|3.1e-06,PPR|PF01535.16|1.9e-09,PPR|PF01535.16|3.1e+02,PPR|PF01535.16|7e+02,PPR_3|PF13812.2|7.7,PPR_3|PF13812.2|0.89,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|6.6e-05,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|2.3e+03,PPR_1|PF12854.3|8.1e+02,PPR_1|PF12854.3|6.5e+02,PPR_1|PF12854.3|0.24,PPR_1|PF12854.3|0.022,PPR_1|PF12854.3|1.2e-05,PPR_1|PF12854.3|3.5e+03 S_Transcript_295089:303-1097(+)
MRATLKQNLISPTHPSLHLSHSTIESFIWNTIIRAHSQFPSSISFSPISVFLRMRRHGVKPDSHTFPFLRQSLNSPTHLILGQKIHAQILQFGFQSDAYVGTSLINMYSSSGELGLAHQMFDEMPERDLPSWNSIINANVQVGLLNKARKLFDGMKERNVITWSCMINGYVKWGEYKEALQLFRDMQVLGVDNVRPNEFTMSGVLSACGRLGALEHGKWAHAYIDKSGMKVDVILGTALIDMYSKCQLNSKKKKKKNVFKMWEH*

Click here to download the sequence:
Link to NCBI Protein BLAST