Transcript Information: S_Transcript_295092.p1


Annotated TAIR IDAT3G08820.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2677122-2679179 | Reverse length=685
E-Value1.2E-279
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.54953099895653
Replicate 20.097622962643871
Replicate 30.16321005383717
Condition 2: 8 Hour
Replicate 10.84924120731946
Replicate 21.0888952877743
Replicate 31.2261328268352
Condition 3: 24 Hour
Replicate 10.28997632952116
Replicate 20.46798430983608
Replicate 30.4092072101125


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_295092.p1 GENE.S_Transcript_295092~~S_Transcript_295092.p1 ORF type:complete len:678 (+),score=115.58,PPR_2|PF13041.2|2.9e-07,PPR_2|PF13041.2|3.5,PPR_2|PF13041.2|8e-09,PPR_2|PF13041.2|0.002,PPR_2|PF13041.2|6.6e-09,PPR_2|PF13041.2|4.1e-05,PPR_2|PF13041.2|3.2e-08,PPR_2|PF13041.2|2.1,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|1.1e+02,PPR|PF01535.16|0.0082,PPR|PF01535.16|0.074,PPR|PF01535.16|0.0031,PPR|PF01535.16|9.3e+02,PPR|PF01535.16|2.6e-05,PPR|PF01535.16|1.1e-08,PPR|PF01535.16|2.1e-05,PPR|PF01535.16|0.0011,PPR|PF01535.16|0.49,PPR|PF01535.16|0.074,PPR|PF01535.16|27,PPR|PF01535.16|8.1e+02,DYW_deaminase|PF14432.2|7.3e+02,DYW_deaminase|PF14432.2|1.4e-42,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|5.7e+03,PPR_3|PF13812.2|3.9e+02,PPR_3|PF13812.2|0.034,PPR_3|PF13812.2|3.1e+03,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|5.2e-05,PPR_3|PF13812.2|7.1e-05,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|9.3,PPR_3|PF13812.2|2.3e+02,PPR_1|PF12854.3|3.9,PPR_1|PF12854.3|9.5e+02,PPR_1|PF12854.3|16,PPR_1|PF12854.3|0.26,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|0.06,PPR_1|PF12854.3|0.00047,PPR_1|PF12854.3|0.0025,PPR_1|PF12854.3|0.074,PPR_1|PF12854.3|6.2e+02,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|1.3e+02 S_Transcript_295092:128-2161(+)
ATGTATAAAGCTTTGGACCTCAAAAACTGCCTTGTTAATGGCTTACAATCCTTCAAACACCTTAAACAAGCTCAAGCTCTTATCTTTCGCCTTGGCTTAGCCCAAGAACATAACTTTCTGAATACCCTTTTAGGCCATTGCTTTAATTTTTGCAATATTGACTATTCTAAACTTGTTTTCAACCAAGTTCAAAACCCCAATATATTTCTGTTCAATACCATGATAAGAGGTTTTGTTTCCTCCAATTTATGTGAAGAATCTATCCATTACTACCACTTGATGCGTTTACAAGGCTTATTGCCTAATAACTTCACATTCCCGTTTGTCCTAAAGGCTTGTGCAAGGATTTGTGATTATAATTTGGGTGTTAAGATTCATAATCTTGCAGTGAAACTGGGTTTTCATGGTGATGTGTATGTTAGTACAAGTTTGGTGGGTCTGTATGCAAAATGTGGATGTGTGAGTGATGCCCACCAGGTGTTTGATGATATTCCTGACAAAAATGTGGTTTCTTGGACTGCTATTATTGGTGGGTATATAGATGCTGGCCAGTTTCAGCAAGCTGTGGACTTGTTTAGGAGTTTTTTGGAGACGGGTTTGAGGCCGGATGCTTTTACTCTTGTTAAGATTGTGTCTGCTTGTTCTGAACTAGGGGAACTTGAAATGGGTGAGTTTGTTCACAGATATATTGTTATGAATGGGATGGGAGTAAATGTCATTGTGGGTACCTCTTTGATTGACATGTATGCCAAATGTGGGAGTATGGAGAAAGCGCGCTGTGTCTTTAATAAGATGCTTGAAAAGGATGTAGTTACATGGACTGCTATGATTCAGGGGTATGCTGCCAATGGTTTCCCAAAGGAAGCATTAGAGTTTTTCTTTAGAATGGAGAAAGAGAATGTGAAACCTGACTGTTATGCACTGCTTGGAGTTTTATCTGCTTGTACTAGGCTAGGGGCTATCGATTTGGGAGAATGGGCATGTACTTCTTTTAATAGGAATGAGTTGATTGACAATCCTGTCCTGGGAACAGCCTTAATTGATATGTATGCAAAATGTGGGGACATGGCATCAGCATGGAGAGTTTTTAAAGAGATGAAGGATAGAGACATTGTTGTTTGGAATGCTGCAATATCCGGTCTATCAATTAATGGCCATATCAAGTTTGCATTTGCCCTTTTTGCCCATATGGAGAAGCTTGGGGTTCAACCTAATGGTAACACTATCCTTGGACTACTTTGTGGCTGTACCCATGCTGGTCTTGTTGATGAAGGGAGGAGTTATTTTAACAGCATGGAGAGTGTTTTTTCAGTGACGCCAACTGTTGAGCATTATGGCTGTATGGTTGATCTTCTGAGCCGTGCTGGTCTGTTACAGGAAGCTCATCATTTGATCAAAAGCATGCCAATGGAGCCGAATGTCATTGTGTGGGGATCATTGCTTAGTGGATGCAGATTACATCGGGATACCCATCTGGCTGAACATGTGTTAGAGCAGTTAGTCCAGTTGGAACCTTGGAATACGGGAAATTATGTTCTCTTGTCAAATATCTACTCTGCAAACAATAAGTGGTATGATGCAGAAGTAACTAGAGCGAAAATGAACGAGGAAGGGATGCAAAAGACACCAGGCTACAGTTGGATTGAAGTGGGTGGCATAATTCATGAATTTGTAGCGGGAGACAAGTCACATCTTATGTCGGATCAGATATATGCAAAATTAGGTGAATTGTTGAAGGATTTGAGAGCATCTGGTTATGTACCGACAACAGAACTTGTTTTGTTTGATGTAGAGGAGGAGGAGAAGGAGCATTTTCTTGGTTATCATAGTGAGAAGTTGGCTATTGCTTTTGGCTTAATCAGCACTCCACCACACAATGTGATCAGAGTCGTGAAAAACCTCCGTGTCTGTGGTGATTGTCATTTGGCAATCAAGATTATTTCGAAAATCACTGGCAGAGAGATTGTAGTTAGAGATACAAACCGATTCCATCATTTTGTTGATGGTTCATGCTCTTGCAAAGATTATTGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_295092.p1 GENE.S_Transcript_295092~~S_Transcript_295092.p1 ORF type:complete len:678 (+),score=115.58,PPR_2|PF13041.2|2.9e-07,PPR_2|PF13041.2|3.5,PPR_2|PF13041.2|8e-09,PPR_2|PF13041.2|0.002,PPR_2|PF13041.2|6.6e-09,PPR_2|PF13041.2|4.1e-05,PPR_2|PF13041.2|3.2e-08,PPR_2|PF13041.2|2.1,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|1.1e+02,PPR|PF01535.16|0.0082,PPR|PF01535.16|0.074,PPR|PF01535.16|0.0031,PPR|PF01535.16|9.3e+02,PPR|PF01535.16|2.6e-05,PPR|PF01535.16|1.1e-08,PPR|PF01535.16|2.1e-05,PPR|PF01535.16|0.0011,PPR|PF01535.16|0.49,PPR|PF01535.16|0.074,PPR|PF01535.16|27,PPR|PF01535.16|8.1e+02,DYW_deaminase|PF14432.2|7.3e+02,DYW_deaminase|PF14432.2|1.4e-42,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|5.7e+03,PPR_3|PF13812.2|3.9e+02,PPR_3|PF13812.2|0.034,PPR_3|PF13812.2|3.1e+03,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|5.2e-05,PPR_3|PF13812.2|7.1e-05,PPR_3|PF13812.2|0.012,PPR_3|PF13812.2|1.7e+03,PPR_3|PF13812.2|9.3,PPR_3|PF13812.2|2.3e+02,PPR_1|PF12854.3|3.9,PPR_1|PF12854.3|9.5e+02,PPR_1|PF12854.3|16,PPR_1|PF12854.3|0.26,PPR_1|PF12854.3|2e+03,PPR_1|PF12854.3|0.06,PPR_1|PF12854.3|0.00047,PPR_1|PF12854.3|0.0025,PPR_1|PF12854.3|0.074,PPR_1|PF12854.3|6.2e+02,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|1.3e+02 S_Transcript_295092:128-2161(+)
MYKALDLKNCLVNGLQSFKHLKQAQALIFRLGLAQEHNFLNTLLGHCFNFCNIDYSKLVFNQVQNPNIFLFNTMIRGFVSSNLCEESIHYYHLMRLQGLLPNNFTFPFVLKACARICDYNLGVKIHNLAVKLGFHGDVYVSTSLVGLYAKCGCVSDAHQVFDDIPDKNVVSWTAIIGGYIDAGQFQQAVDLFRSFLETGLRPDAFTLVKIVSACSELGELEMGEFVHRYIVMNGMGVNVIVGTSLIDMYAKCGSMEKARCVFNKMLEKDVVTWTAMIQGYAANGFPKEALEFFFRMEKENVKPDCYALLGVLSACTRLGAIDLGEWACTSFNRNELIDNPVLGTALIDMYAKCGDMASAWRVFKEMKDRDIVVWNAAISGLSINGHIKFAFALFAHMEKLGVQPNGNTILGLLCGCTHAGLVDEGRSYFNSMESVFSVTPTVEHYGCMVDLLSRAGLLQEAHHLIKSMPMEPNVIVWGSLLSGCRLHRDTHLAEHVLEQLVQLEPWNTGNYVLLSNIYSANNKWYDAEVTRAKMNEEGMQKTPGYSWIEVGGIIHEFVAGDKSHLMSDQIYAKLGELLKDLRASGYVPTTELVLFDVEEEEKEHFLGYHSEKLAIAFGLISTPPHNVIRVVKNLRVCGDCHLAIKIISKITGREIVVRDTNRFHHFVDGSCSCKDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST