Transcript Information: S_Transcript_295112.p1


Annotated TAIR IDAT1G50120.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rgp1 (InterPro:IPR014848), Immunoglobulin E-set (InterPro:IPR014756); Has 144 Blast hits to 140 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 86; Fungi - 10; Plants - 39; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:18562302-18566015 | Forward length=532
E-Value2E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.99798754631927
Replicate 20
Replicate 31.38320520627
Condition 2: 8 Hour
Replicate 10
Replicate 21.1185924319863
Replicate 30
Condition 3: 24 Hour
Replicate 10.27306104363243
Replicate 21.1331905788174
Replicate 30.6305511101279


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_295112.p1 GENE.S_Transcript_295112~~S_Transcript_295112.p1 ORF type:3prime_partial len:80 (+),score=7.92 S_Transcript_295112:451-687(+)
ATGCACGTGAAATTTCGATTCTGTATCCTGGCACGTGATTTTATCATTATGGTCCTTTGCAAGAAGGATCTTTCTTGTTTCTCCTCCAAACTTCTTTCATTTTTTCTCCTCTTTATTGATTTTTCCCTCCCTTCGGCATCATTTCCTCCCAGGTATGATCATCCGCTTCTTATAGAGGGAAGGGACAAATGTGAGTGGTCTCTTCCAATTACCGTGCATGCACCTCAGCCAGGACCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_295112.p1 GENE.S_Transcript_295112~~S_Transcript_295112.p1 ORF type:3prime_partial len:80 (+),score=7.92 S_Transcript_295112:451-687(+)
MHVKFRFCILARDFIIMVLCKKDLSCFSSKLLSFFLLFIDFSLPSASFPPRYDHPLLIEGRDKCEWSLPITVHAPQPGP

Click here to download the sequence:
Link to NCBI Protein BLAST