Transcript Information: S_Transcript_295120.p1


Annotated TAIR IDAT1G50120.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rgp1 (InterPro:IPR014848), Immunoglobulin E-set (InterPro:IPR014756); Has 144 Blast hits to 140 proteins in 61 species: Archae - 0; Bacteria - 0; Metazoa - 86; Fungi - 10; Plants - 39; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:18562302-18566015 | Forward length=532
E-Value1.7E-100
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8013685510716
Replicate 22.6126987633899
Replicate 32.6693433805211
Condition 2: 8 Hour
Replicate 13.6477641331938
Replicate 25.494840016775
Replicate 34.7680185432195
Condition 3: 24 Hour
Replicate 11.7245960650469
Replicate 22.8826777882196
Replicate 33.4293130550816


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_295120.p1 GENE.S_Transcript_295120~~S_Transcript_295120.p1 ORF type:internal len:228 (-),score=47.67,Rgp1|PF08737.6|2.8e-15 S_Transcript_295120:2-682(-)
GCAGAAGCTGATGAAGTTCTACACAATGCAAGTGGGGATATTTTATCATCCAACAGTCATCCAGCTGTATTCTCACCAAGCCAGCAAAAAAGATTGTCAAAATCATTTTCGAAAGATAGTGATGGAAAGGAGGTGTCTTCTCCATTGGAACCTGCAGAATCTGTTGCATCAGAAGGCTATATTCGAGGCAGGTCTTATAACATTAAGCTTGACGATCAAGTTCTCCTTAGATTCTCTCCAAGGAAGTCAGACTCAAGTTACTATTTCAGTGATATGATAGGTGGGACCCTTACTTTCTTTCATGAAGAAGGAACAAGGAGGTGCCTTGAGGTTTCAGTTACCTTAGAGATCTTGGAGACTATAAATCGACGTTTTGTTCACCCATCTCGTAGGAATGCCCCCACAATAATAAAGGTTCACAGTGATCATCATGAGGTTGTTGCTGATATAGTGCAAACAAGCTTTCTCTTCTCTATCCCCATGGATGGGCCAATGTCTTTTTCAACACCCCATGTATCTGTTCAATGGGCTCTGCGGTTTGAATTTTTCACCACTCCAAAGAATGTTGACTACAGCAGGTATGATCATCTGCTTCTTGTAGAGGGAAGAGACAAATGTGAGTGGTCTCTTCCAATTACCGTGCATGCACCTCAGCCGGGACCTGCAGCTGCCCATGCAAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_295120.p1 GENE.S_Transcript_295120~~S_Transcript_295120.p1 ORF type:internal len:228 (-),score=47.67,Rgp1|PF08737.6|2.8e-15 S_Transcript_295120:2-682(-)
AEADEVLHNASGDILSSNSHPAVFSPSQQKRLSKSFSKDSDGKEVSSPLEPAESVASEGYIRGRSYNIKLDDQVLLRFSPRKSDSSYYFSDMIGGTLTFFHEEGTRRCLEVSVTLEILETINRRFVHPSRRNAPTIIKVHSDHHEVVADIVQTSFLFSIPMDGPMSFSTPHVSVQWALRFEFFTTPKNVDYSRYDHLLLVEGRDKCEWSLPITVHAPQPGPAAAHAR

Click here to download the sequence:
Link to NCBI Protein BLAST