Transcript Information: S_Transcript_29554.p1


Annotated TAIR IDAT4G16630.1
Annotated Gene NameDEA(D/H)-box RNA helicase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9362176-9366449 | Reverse length=789
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.207429277246
Replicate 213.499334850555
Replicate 313.943901540296
Condition 2: 8 Hour
Replicate 117.301731766731
Replicate 214.80401304866
Replicate 315.168150317291
Condition 3: 24 Hour
Replicate 110.598595763631
Replicate 210.629388717748
Replicate 310.979407470152


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_29554.p1 GENE.S_Transcript_29554~~S_Transcript_29554.p1 ORF type:complete len:742 (+),score=197.43,DEAD|PF00270.25|4.3e-46,DEAD|PF00270.25|4.8e+03,DEAD|PF00270.25|6.7e+02,Helicase_C|PF00271.27|14,Helicase_C|PF00271.27|3.7e+03,Helicase_C|PF00271.27|1.8e-27 S_Transcript_29554:209-2434(+)
ATGAGTTCAGGGTTTGTATTCGAGGTTCCAAGCGACGAAGAACCTGAATACGACCTTCACTCCGAAGAAGACGACGATGGCGATGATGAACTCGAAGGCTCTCAATCCCCGAAGAAGACAAAATTAAAATCTCAATCACCTTGGGACTTCGCTAAATTCTCCCAAGCAGTTGCTGAAGAACACGCTCGCCGTAACACCACCTCCGTAGACGATAAAATTTCCAAACTCCGTCAACAACGGTCTCTCTCTCTTCCTCTCAACGACGATGGCGAAGACGACAGCGACGATTCCTCCGATTCTGAGCCTCACAGACAAGAGGATTACAAGCCAGAAGAGGGAGATGATGATGTGGATGATGAGGCTGTTACTAAAGAGCCGTTCTTTGCACCTGCAGAAGGTGTTTCTTTTCATGCAAAGTCGTTTATGGAGCTTAATCTTTCGAGGCCCTTACTCAGGGCTTGTGAAGCATTAGGGTACAAGAAGCCAACACCTATCCAGGCAGCTTGTATACCAGTAGCGATGACTGGAAGGGATATATGTGGGAGTGCAATTACTGGTTCTGGAAAGACTGCTGCATTCAGCTTACCAACATTAGAGAGGTTACTATACCGTCCTAAGCGTGTTCCAGCTATTAGGGTCCTTATTCTTACTCCAACTAGAGAGCTAGCTGTTCAGGTCCACAGCATGATAGAAAAACTTGCCCAATTCACTGATATCAGATGCTGCCTGATTCTTGGTGGCCTATCAATGAAGGTGCAAGAGGTGGCACTTAGGTCAATGCCAGATATTGTCGTGGCTACTCCAGGACGGCTGATTGACCATTTACGCAATTCAATGTCTGTGGATTTGGATGATCTTGCTGTCTTGATCCTGGATGAGGCTGATCGACTTTTGGAGCTTGGTTTTAGTGCTGAGATTCAAGAACTTGTCCGTTTGTGTCCCAAGCGGAGACAGACCATGTTATTTTCCGCCACAATGACTGAAGAGGTTGATGAGCTCATTAAATTATCCTTGGCTAAACCACTGCGTCTTTCTGCTGACCCATCAACTAAACGACCAACAACCTTGACAGAGGAGGTTGTTAGAATAAGGAGAATGCGCGAAGCACATCAGGAGGCGGTGCTTCTTGCATTGTGCTCCAAAACATTCACATCCAAGGTGATCATATTTAGTGGGACAAAACAGGCTGCTCATAGATTGAAGGTATTGTTTGGATTAGCAGGTTTTAAAGCAGCAGAGCTCCATGGGAATCTTACACAAACACAACGTCTTGATGCTCTTGAGCTTTTCAGAAAACAAGAGGTGGATTTCTTGATTGCAACTGATGTTGCTGCTCGTGGGCTTGATATTGTTGGGGTTCAGACAGTTATTAATTGGTCTTGTCCTCGTGATCTTACAACTTATGTGCATCGAGTAGGTCGTACTGCAAGAGCTGGCAGGGAAGGATATGCTGTTACGTTTGTCACTGATAATGATCGCTCTCTACTGAAAGCCATTGCAAAAAGAGCTGGTTCCAAGTTGAAGAGCCGAATTGTCGCTGAGCAATCAATCAATAAGTGGTCACAGATGGTTGAGCAGATGGAAGATCAGGTTGCTGTCATCCTTGAAGAAGAGAAAGAAGAAATGGCTTTGAGAAGAGCAGAGATGGAAGCTGCAAAGGCAGAAAATATGATTGAGCACAAGGATGAGATTTTCTCACGACCAAAAAGGACATGGTTTATGACAGAGAGGGAAAAGAAAATGATGGCCAAGGCCACAAAGGCATCCATGGAGAAAGAAAAGAGCCCTGGTAATGAGGTTATTAGTGCTGAAAAAGCTGAAGAACTGAAGATGAAGGAAAAAAGAAAGCGAGAGCGTGAGAAAAAGTTGCCTCGAAAGAAGCGTAGAAAGCTGGAAGCAGCCAGGGAGATGTTGGAAGAAGAAGATGACTCTTATGATTCGGAAGAGGAAACTAAAAAGGGTAAGAAAGATAAAAGTGGAATACCACTTGTCGACGTGGCATATCGTCGAGCAAAAGCTGTTAAAGCCGGGAAGAGAGCACAAGAGTCGGGTAAGAAGCTCAAAAAGGTTGGCAAACAGGCCAGGCAGCCTCCATCAAGAACAGAAGAAATGCAGGACCTATTCCAGGCAGACATGAGTGTCCGACATCAGAAAAAGTCTGTCCAAAGATCTGGAAAGTCAAAGAATTCATTCAAGAGTAAATCAAGGTATAAACGGAGGAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_29554.p1 GENE.S_Transcript_29554~~S_Transcript_29554.p1 ORF type:complete len:742 (+),score=197.43,DEAD|PF00270.25|4.3e-46,DEAD|PF00270.25|4.8e+03,DEAD|PF00270.25|6.7e+02,Helicase_C|PF00271.27|14,Helicase_C|PF00271.27|3.7e+03,Helicase_C|PF00271.27|1.8e-27 S_Transcript_29554:209-2434(+)
MSSGFVFEVPSDEEPEYDLHSEEDDDGDDELEGSQSPKKTKLKSQSPWDFAKFSQAVAEEHARRNTTSVDDKISKLRQQRSLSLPLNDDGEDDSDDSSDSEPHRQEDYKPEEGDDDVDDEAVTKEPFFAPAEGVSFHAKSFMELNLSRPLLRACEALGYKKPTPIQAACIPVAMTGRDICGSAITGSGKTAAFSLPTLERLLYRPKRVPAIRVLILTPTRELAVQVHSMIEKLAQFTDIRCCLILGGLSMKVQEVALRSMPDIVVATPGRLIDHLRNSMSVDLDDLAVLILDEADRLLELGFSAEIQELVRLCPKRRQTMLFSATMTEEVDELIKLSLAKPLRLSADPSTKRPTTLTEEVVRIRRMREAHQEAVLLALCSKTFTSKVIIFSGTKQAAHRLKVLFGLAGFKAAELHGNLTQTQRLDALELFRKQEVDFLIATDVAARGLDIVGVQTVINWSCPRDLTTYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRAGSKLKSRIVAEQSINKWSQMVEQMEDQVAVILEEEKEEMALRRAEMEAAKAENMIEHKDEIFSRPKRTWFMTEREKKMMAKATKASMEKEKSPGNEVISAEKAEELKMKEKRKREREKKLPRKKRRKLEAAREMLEEEDDSYDSEEETKKGKKDKSGIPLVDVAYRRAKAVKAGKRAQESGKKLKKVGKQARQPPSRTEEMQDLFQADMSVRHQKKSVQRSGKSKNSFKSKSRYKRRK*

Click here to download the sequence:
Link to NCBI Protein BLAST