Transcript Information: S_Transcript_2957.p1


Annotated TAIR IDAT3G16090.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:5456513-5458694 | Forward length=492
E-Value4.5E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 132.959733237066
Replicate 233.901359563986
Replicate 329.638326551694
Condition 2: 8 Hour
Replicate 134.733223795656
Replicate 231.64798100254
Replicate 329.345394534771
Condition 3: 24 Hour
Replicate 131.73132127631
Replicate 229.849898173726
Replicate 331.715524672016


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_2957.p1 GENE.S_Transcript_2957~~S_Transcript_2957.p1 ORF type:complete len:369 (+),score=72.23,zf-RING_2|PF13639.2|6e-12,zf-rbx1|PF12678.3|5.3e-09,zf-C3HC4|PF00097.21|6.9e-08,zf-C3HC4_2|PF13923.2|2.5e-06,zf-C3HC4_3|PF13920.2|3.3e-06 S_Transcript_2957:3-1109(+)
ATGATACTTGCCACGACAACCGTGGCAATGTTTGTCAAATACATATTTTATGTGAGCGACATGCTTATGGAAGGACAATGGGAGAAGAAGGCTGTCTGTACTTTCTATTTGGAGCTTATCCGTGACTTGCTGCACTTGTCTATGTACCTGTGTTTCTTTATGGTGATTTTCGTGAACTATGGTGTGCCTTTGCATCTGATAAGAGAGCTCTATGAAACATTTCGCAACTTTAAGATCCGCATTGCTGATTATATTCGCTACCGAAAGATCACTTCGAATATGAATGATCGTTTTCCAGATGCAACCCCAGAAGAACTGAATGCAAGTGATGCAACCTGCATCATTTGCCGTGAGGAAATGACCACCGCCAAGAAGCTAAGATGTGGACATCTTTTTCATGTGCACTGCCTTCGGTCCTGGTTGGAACGACAGAATACTTGTCCAACCTGCAGAGCCCTTGTCATACCTCCTGAAACCGGAACTTCTACTGCTGGAGGGCAACATGGGATGCAACCTGGTGTTTATCAACCTGCTTCTGCTAGCACATCTAGCCCTGGCCAAAGTTCAGCTAGTGGTACAGTGGCAAATCCTACTTTGGACAGTAATCAGGCAAGAATTCAGGCAGCAGCTGCAGCTGCTGCAGTGTACCAGAAGTCCTTTGTCTATCCTTGTGCAAACACATTGGTATGGTGCCCTGGATATGCTGCACTACCACAGGTTTATGGAACGTTGCCTGGTTCATCTAATGCAGATTCTGGTGAGATATTAGGTTCAGCAGAACAACTGCAGCGTCAACAACTTGGATTGTCTAGTGGGCAAATGAGTTTGTCTTTGGGTCAGTTGCCTCCTTATTCTTTTGCGCCTATCCAAGCACCTGGGCCAGATATGATGCCTGCCGGAAGCAGTAATCTTTCAACTGACTCGCTGAGAAACTTTCTTGAGCATCAAATTCAGGTCCTACAAACTCAACTCGAGTACTTACGGAAACAACAGCAGGAAAAAACTGCCAGCACGAGTGTTTCAGCATCAACCGATAGCAATGACCAGAACACCAAGTCAACTTCAGACTCCAATTCTTCGGCAGAAAATGAGGAAGCCAACTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_2957.p1 GENE.S_Transcript_2957~~S_Transcript_2957.p1 ORF type:complete len:369 (+),score=72.23,zf-RING_2|PF13639.2|6e-12,zf-rbx1|PF12678.3|5.3e-09,zf-C3HC4|PF00097.21|6.9e-08,zf-C3HC4_2|PF13923.2|2.5e-06,zf-C3HC4_3|PF13920.2|3.3e-06 S_Transcript_2957:3-1109(+)
MILATTTVAMFVKYIFYVSDMLMEGQWEKKAVCTFYLELIRDLLHLSMYLCFFMVIFVNYGVPLHLIRELYETFRNFKIRIADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMTTAKKLRCGHLFHVHCLRSWLERQNTCPTCRALVIPPETGTSTAGGQHGMQPGVYQPASASTSSPGQSSASGTVANPTLDSNQARIQAAAAAAAVYQKSFVYPCANTLVWCPGYAALPQVYGTLPGSSNADSGEILGSAEQLQRQQLGLSSGQMSLSLGQLPPYSFAPIQAPGPDMMPAGSSNLSTDSLRNFLEHQIQVLQTQLEYLRKQQQEKTASTSVSASTDSNDQNTKSTSDSNSSAENEEANS*

Click here to download the sequence:
Link to NCBI Protein BLAST