Transcript Information: S_Transcript_29576.p1


Annotated TAIR IDAT5G46020.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Casein kinase substrate, phosphoprotein PP28 (InterPro:IPR019380); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:18663075-18664629 | Reverse length=164
E-Value6E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.328507282543
Replicate 29.3915928521854
Replicate 38.0998503069867
Condition 2: 8 Hour
Replicate 111.959509434608
Replicate 212.697535714439
Replicate 313.106365757117
Condition 3: 24 Hour
Replicate 116.23606205382
Replicate 211.638173512178
Replicate 311.24766845093


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_29576.p1 GENE.S_Transcript_29576~~S_Transcript_29576.p1 ORF type:complete len:148 (+),score=40.27 S_Transcript_29576:209-652(+)
ATGGGGAGAGGAAAGTTCAAGAGCAAGCCTACTGGTCGCCGTCAATTCTCCACCCCTGATGAGATCTTAGGTGGGCCTTCTCGTCCTCGTACCTTTAGGAAGAAAGAAGCTGAAGAGGAAGAGGAAGAAGAGATAGAGGAGGAGGAAGAAGGATCCGAAGAAGAGTCTGATGATGAGCAGCAAAAGCGGAAAGGGACACAGGGTATTATTGAGATTGAAAACCCCAATTTAGTGAAGGCAAAGAATGTAAAGGCTAAAGATATTGATCTTGAGAAAACAACAGAGCTTTCAAGACGTGAAAGGTTGGTCTTTTCTTTGCTATTATTATCATCGTTTTCTAAAAAACTTTTCCCTTCTCCTTTAGGGGCTAATCATTCTCTGCTAAACTTGGTTGTTATTATTTCTAAAATTGGATCGTATAATAATTTAGTCCCAGGGAACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_29576.p1 GENE.S_Transcript_29576~~S_Transcript_29576.p1 ORF type:complete len:148 (+),score=40.27 S_Transcript_29576:209-652(+)
MGRGKFKSKPTGRRQFSTPDEILGGPSRPRTFRKKEAEEEEEEEIEEEEEGSEEESDDEQQKRKGTQGIIEIENPNLVKAKNVKAKDIDLEKTTELSRRERLVFSLLLLSSFSKKLFPSPLGANHSLLNLVVIISKIGSYNNLVPGN*

Click here to download the sequence:
Link to NCBI Protein BLAST