Transcript Information: S_Transcript_29579.p1


Annotated TAIR IDAT5G46020.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Casein kinase substrate, phosphoprotein PP28 (InterPro:IPR019380); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:18663075-18664629 | Reverse length=164
E-Value1E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1205.39359235495
Replicate 2191.66202462234
Replicate 3192.91328234687
Condition 2: 8 Hour
Replicate 1210.63729086248
Replicate 2199.97413170602
Replicate 3177.58847268445
Condition 3: 24 Hour
Replicate 1206.38724279457
Replicate 2166.15493763028
Replicate 3185.99323542914


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_29579.p1 GENE.S_Transcript_29579~~S_Transcript_29579.p1 ORF type:complete len:163 (+),score=68.68,PP28|PF10252.5|1.3e+03,PP28|PF10252.5|6.6e-28 S_Transcript_29579:209-697(+)
ATGGGGAGAGGAAAGTTCAAGAGCAAGCCTACTGGTCGCCGTCAATTCTCCACCCCTGATGAGATCTTAGGTGGGCCTTCTCGTCCTCGTACCTTTAGGAAGAAAGAAGCTGAAGAGGAAGAGGAAGAAGAGATAGAGGAGGAGGAAGAAGGATCCGAAGAAGAGTCTGATGATGAGCAGCAAAAGCGGAAAGGGACACAGGGTATTATTGAGATTGAAAACCCCAATTTAGTGAAGGCAAAGAATGTAAAGGCTAAAGATATTGATCTTGAGAAAACAACAGAGCTCTCAAGACGTGAGAGGGAGGAGTTGGAGAAACAGAGAGCCCATGAAAGATACATGAGGTTACAAGAGCAGGGGAAAACAGAACAAGCAAGAAAAGACTTGGAGAGGTTAAAACTTATCCGTGAGCAAAGAGCAGAAGCTGCCAGGAAGAGAGAGGAAGAAAAAGCTGCCAAGGAGCTGAAAAAAGCTGAAGCTCGCAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_29579.p1 GENE.S_Transcript_29579~~S_Transcript_29579.p1 ORF type:complete len:163 (+),score=68.68,PP28|PF10252.5|1.3e+03,PP28|PF10252.5|6.6e-28 S_Transcript_29579:209-697(+)
MGRGKFKSKPTGRRQFSTPDEILGGPSRPRTFRKKEAEEEEEEEIEEEEEGSEEESDDEQQKRKGTQGIIEIENPNLVKAKNVKAKDIDLEKTTELSRREREELEKQRAHERYMRLQEQGKTEQARKDLERLKLIREQRAEAARKREEEKAAKELKKAEARK*

Click here to download the sequence:
Link to NCBI Protein BLAST