Transcript Information: S_Transcript_29581.p1


Annotated TAIR IDAT1G29340.1
Annotated Gene Nameplant U-box 17
Annotated Gene Symbol(s)PUB17, ATPUB17
Annotation TypeOrtholog
Chromosome Positionchr1:10264412-10266601 | Forward length=729
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.640089769563
Replicate 212.475616379319
Replicate 312.920189763302
Condition 2: 8 Hour
Replicate 111.464624878013
Replicate 212.525742553162
Replicate 311.548558103534
Condition 3: 24 Hour
Replicate 111.926454496258
Replicate 212.973296041614
Replicate 310.643843251741


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_29581.p1 GENE.S_Transcript_29581~~S_Transcript_29581.p1 ORF type:complete len:718 (+),score=169.65,U-box|PF04564.11|1e+04,U-box|PF04564.11|1.2e-20,Arm|PF00514.19|1e+04,Arm|PF00514.19|9.1e-06,Arm|PF00514.19|26,Arm|PF00514.19|0.0077,Arm|PF00514.19|0.13,Arm|PF00514.19|13 S_Transcript_29581:282-2435(+)
ATGGCTACAGCAGCTGCATTTGCTTCATTAAGGAGAAGAAGATCCCCTTCATTAGAAGCATTTTTAGCTCCAGTAGACCTAACAGATGGTGGGTTAATTGGGACTTTATCATCAGTATCAAAAGATTTGATTTTGTCATTTTCTGGTAAGAAATTGGCTTTTCAAAGGAAGAATTCTGTTACTTTGATTAGGAGACTTGAAGTTTTTGTTGTGTTTTTGGAGTATTTGAAGGAATTCAGGTCAGTTTCTAGGTTCTCATATACAGCTATTGTATGCTTTAAAGAGCTTTATCTACTATTCTATAGATGTAAGATATTGTTGGGTTATTGCTCAAAATCTAGTAATTTGTGGTTACTCCTTCAAAACCAAGCAATTTCAGGGCATTTTCATGACCTTAACCAAGAAATGTCAACAGTTTTGGATGTTTTGCCTATGAAAGAGCTTTGTTTGAGTGAGGATGTTAGGGAACAAATTGAATTGTTGCAAAAACAATTGAGGAGGGCTAAGTTTTTTGTTGATAAACATGATGAAGGGTTAAGGCGAAGGCTGTATTCGTTCTTAGATGAGTTTGAGAAGGGAAAGATACCTGATTCGAATGACCTTCGGTCGTTTTTCATTAATGAAGTTGGTATTCGAGATGCTAAAACTTGTAGGAGGGAGATTGAGTTCTTGGAGGAACAAATGGTTAACCATGAGGGGGATATTGAGCCTACATCTGCTGTTCTTAATGGGTTTGTGGCTCTTGTGCGGTATTGCAGGTTCTTGCTGTTTGGGTTTGGGAAGGATGAGGTGGAAGTTGAAATTGGGAGCCAAAGGAGGATGAGGAAAGGTGGGGTTGTTAATGAGGAAATTGCTGACACTTTCCTTACTATTCCGAAGGATTTCTGCTGCCCCATATCGTTGGATTTGATGCGCGATCCAGTGATTGTATCCACAGGGCAGACCTATGATCGGTCTTCGATAGCAAGGTGGATGGATGAAGGGCATTCCACTTGTCCAAAGACAGGACAAATGCTTGCCCATGCTCGTTTGGTCCCTAATCGAGCTCTCAGGAACCTGATAATGCAATGGTGTTCGGCCAATGGAGTTCCATTTGATCCCCTTGAGGGTTCAGATTCATCGTCGGAGTTGGCTTGGGCTTCGTCCTCAAAGGCAGCCATCGAAGCCAACAAGGCTACTGCCAATCTTCTTATCCAACAACTGGCTGTTGGGTCAGAGGATGCTCAAACTATTGCTGCTCGGGAAATCAGGCTGTTGGCCAAGACGGGGAGGGAGAACCGAGCTTTCATTGCTGAGGCTGGTGCAATCCCTCATTTGAAGAAGCTATTGTTGTCGAAGAACACGATTGCTCAAGAGAATTCGGTCACAGCTATGCTTAACTTGTCGATATACAACAAGAACAAGAGCAGAATAATGGAGGAACAGGGATGCCTGGAGTCAATTGTCGACGTGTTGAGAAACGGTCACACAACCGAGGCAGTAGAGAATGCTGCCGCCACGCTGTTTAGCCTGTCAGCAGTTCATGATTACAAGAAGAGAATAGCACAAGAAAACGGAGCAGTTGAGGCTCTTTCCGAGCTCTTGAGGGGTGGAACCCCTCGAGGGAAGAAAGACGCGGTCACAGCTTTGTTCAACCTCTCCACACACCCGGAAAACTGCGTGAGGATCATCAAGGCAGGGGCAGTGGGAGCACTAGTCGAGGCTATGGAGGTTGAGGGAGTGTCAGAAGAGGCTGCAGGCGCGTTAGCCTTGATAGTGAGGCAGCCGGTTGGGGCTGAAGCCGTTGGGAAGGAGGAGATGGCGGTGGCTGGTCTGCTTGGGATGATGCGTTGTGGGACCCCTCGAGGGAAGGAGAACGCAGTTGCTGCATTGCTGGAGCTGTGTCGGAGTGGTGGCGCTGCTGCCACTGAGAGAGTGCTCAAGGCACCAGCATTGGCTAGTTTGCTCCAAACCCTACTGTTTACCGGGACCAAACGAGCTAGACGAAAGGCGGCTTCTCTTGCTCGGGTTTTCCAGAGGAGAGAACATTCAGCAGTTCAGTATAATGGAATTGGAATGGGATATGGTTTTGCTGGTAACTCAGCTACTAATAGAGATACAGGGTTTGCTGGTGATGTTTCAGTGCCCATGTCAATATCAGTTCCAGTTGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_29581.p1 GENE.S_Transcript_29581~~S_Transcript_29581.p1 ORF type:complete len:718 (+),score=169.65,U-box|PF04564.11|1e+04,U-box|PF04564.11|1.2e-20,Arm|PF00514.19|1e+04,Arm|PF00514.19|9.1e-06,Arm|PF00514.19|26,Arm|PF00514.19|0.0077,Arm|PF00514.19|0.13,Arm|PF00514.19|13 S_Transcript_29581:282-2435(+)
MATAAAFASLRRRRSPSLEAFLAPVDLTDGGLIGTLSSVSKDLILSFSGKKLAFQRKNSVTLIRRLEVFVVFLEYLKEFRSVSRFSYTAIVCFKELYLLFYRCKILLGYCSKSSNLWLLLQNQAISGHFHDLNQEMSTVLDVLPMKELCLSEDVREQIELLQKQLRRAKFFVDKHDEGLRRRLYSFLDEFEKGKIPDSNDLRSFFINEVGIRDAKTCRREIEFLEEQMVNHEGDIEPTSAVLNGFVALVRYCRFLLFGFGKDEVEVEIGSQRRMRKGGVVNEEIADTFLTIPKDFCCPISLDLMRDPVIVSTGQTYDRSSIARWMDEGHSTCPKTGQMLAHARLVPNRALRNLIMQWCSANGVPFDPLEGSDSSSELAWASSSKAAIEANKATANLLIQQLAVGSEDAQTIAAREIRLLAKTGRENRAFIAEAGAIPHLKKLLLSKNTIAQENSVTAMLNLSIYNKNKSRIMEEQGCLESIVDVLRNGHTTEAVENAAATLFSLSAVHDYKKRIAQENGAVEALSELLRGGTPRGKKDAVTALFNLSTHPENCVRIIKAGAVGALVEAMEVEGVSEEAAGALALIVRQPVGAEAVGKEEMAVAGLLGMMRCGTPRGKENAVAALLELCRSGGAAATERVLKAPALASLLQTLLFTGTKRARRKAASLARVFQRREHSAVQYNGIGMGYGFAGNSATNRDTGFAGDVSVPMSISVPVV*

Click here to download the sequence:
Link to NCBI Protein BLAST