Transcript Information: S_Transcript_296080.p1


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value3E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.70342734542327
Replicate 20.87473614985741
Replicate 30.89370086748725
Condition 2: 8 Hour
Replicate 11.3152223103078
Replicate 21.0840983922334
Replicate 30.37560964942698
Condition 3: 24 Hour
Replicate 11.5397274707027
Replicate 21.3977681148408
Replicate 30.33333098332753


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_296080.p1 GENE.S_Transcript_296080~~S_Transcript_296080.p1 ORF type:3prime_partial len:227 (+),score=40.58,RVT_1|PF00078.23|2e-18 S_Transcript_296080:303-980(+)
ATGATGTGTAATGTCCTTAAACAAGCCCTTCCAATAGAAAACAACTTTGATTCTTTTAAGGGTGACATCCCTACCAGTGTCCTCCCATTGGTGAATCATGTGCCCAACTTAAAATTTTGGCGCTCAAGCCCCAACCACAAAATTTCCTTTCCTCCTTGGACTAGTGTTTACAAGATTCTCACTAAGGTTTTATTAGTGCGTCTTGGGGAGGTGCCTGGGGAGACTATTTCTATGGCTCAGAGTGCTTTTGTGGAGGGGAGACAGATTTTGGATGCATCAATGGTAGATAATGAGGTGTTTGATGAGCCTTGGAGAAAGGGTTTTAGAGGGGTGTTTAGGCTTGATTTTGAGAAGGCCTATGATTGTGTGTCTTGGGATGTCCTAGACAGGGTTATAAAAGCTAAGGGCTTTGGAGGGTGCTGGCGTAAATGGATTCGGGGGTGCTTTGGGAATGCTAGTTTCTCTGTCTTGGTGAATGGGCCCCTAGGGATTGGTTATCTTCTTCTCGGGGGTTTGCGTCAAGGTGACCTGTTGTCTCCTTTTCTTTTTACTCTGGTGTATGTTCTGAGTCAGATGTTGCAGAGGGGGGTGGAGAAAGGGAAAGTTGAGGGTTTCAAGATAGGTAGGGAGGGTGTCTCGGTCTCTCATCTTCAGTTGATACTATTCTTTTTCTTTCGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_296080.p1 GENE.S_Transcript_296080~~S_Transcript_296080.p1 ORF type:3prime_partial len:227 (+),score=40.58,RVT_1|PF00078.23|2e-18 S_Transcript_296080:303-980(+)
MMCNVLKQALPIENNFDSFKGDIPTSVLPLVNHVPNLKFWRSSPNHKISFPPWTSVYKILTKVLLVRLGEVPGETISMAQSAFVEGRQILDASMVDNEVFDEPWRKGFRGVFRLDFEKAYDCVSWDVLDRVIKAKGFGGCWRKWIRGCFGNASFSVLVNGPLGIGYLLLGGLRQGDLLSPFLFTLVYVLSQMLQRGVEKGKVEGFKIGREGVSVSHLQLILFFFFR

Click here to download the sequence:
Link to NCBI Protein BLAST