Transcript Information: S_Transcript_296120.p1


Annotated TAIR IDAT1G18485.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:6363172-6366084 | Forward length=970
E-Value5E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.47599677956865
Replicate 30.22676433622321
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.26831962133102


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_296120.p1 GENE.S_Transcript_296120~~S_Transcript_296120.p1 ORF type:internal len:94 (+),score=7.11,PPR|PF01535.16|0.16,PPR|PF01535.16|7.2e-05,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|0.00043 S_Transcript_296120:2-280(+)
AATGTATTACCCGTTTTCTCAAACAAGTCACAGCTAATGAGGTTAAAAGAACTTCATTGCTACTCATACAAACATGGATTTCTTCGACAAGTATTGGTGTGTAATGCTTTTATAGCCGCCTATTCGAAATGTGAGAAATTAAGTTCAGCTAGTTCTGTCTTTAGTGGGATTGAGATCAAAACAGTGAACTCTTGGAATGCACTGATTGATGGCCAGGCACAATATGGAGATCGGAGAAAAGCTATAGATTTGTACCTCGAAATGACATCTTTAGGCTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_296120.p1 GENE.S_Transcript_296120~~S_Transcript_296120.p1 ORF type:internal len:94 (+),score=7.11,PPR|PF01535.16|0.16,PPR|PF01535.16|7.2e-05,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|0.00043 S_Transcript_296120:2-280(+)
NVLPVFSNKSQLMRLKELHCYSYKHGFLRQVLVCNAFIAAYSKCEKLSSASSVFSGIEIKTVNSWNALIDGQAQYGDRRKAIDLYLEMTSLGL

Click here to download the sequence:
Link to NCBI Protein BLAST