Transcript Information: S_Transcript_296597.p1


Annotated TAIR IDAT5G14770.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4772881-4775697 | Reverse length=938
E-Value2E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8013685510716
Replicate 23.4835983511865
Replicate 32.9120109605685
Condition 2: 8 Hour
Replicate 14.4895558562385
Replicate 26.2798171620285
Replicate 35.4224524609163
Condition 3: 24 Hour
Replicate 16.1318971201668
Replicate 24.1749126588008
Replicate 35.9736420959486


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_296597.p1 GENE.S_Transcript_296597~~S_Transcript_296597.p1 ORF type:5prime_partial len:114 (-),score=17.97,PPR_2|PF13041.2|2.1e-11,PPR_2|PF13041.2|2.8e-07,PPR_2|PF13041.2|1.8e-05,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|2.5e-06,PPR|PF01535.16|0.00023,PPR_1|PF12854.3|0.0017,PPR_1|PF12854.3|1.3e-06,PPR_1|PF12854.3|0.00033,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|0.58,PPR_3|PF13812.2|0.041 S_Transcript_296597:486-827(-)
AATACTCTGCTAAATGGTCTTTCTTCAGTGGGTTTGATGAGAGAAGCAGCTGGTTTACTTGATCAAATGAAAGGAAGAGGAATCGTGCCTAATGCTATTACTTACAATATTTCGGTCTCTGGTTATGCAAAGATGGGAAATACAAAGGAGTGCATCAGACTTTACTGTGAAATGGTTTGCAGAGGCTTTGCCCCTACTACTGGTGTATATAATAGGCTTATCCACCAATTTGTTCAGTTGGGAAAGATGAACCAGGCAACAGAACTTATGAATGAGATGCAAGTGAGACATCTGATTGAATTAGTCTGCAATTCCTGTAGGCGTAACTCTGGTAAATGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_296597.p1 GENE.S_Transcript_296597~~S_Transcript_296597.p1 ORF type:5prime_partial len:114 (-),score=17.97,PPR_2|PF13041.2|2.1e-11,PPR_2|PF13041.2|2.8e-07,PPR_2|PF13041.2|1.8e-05,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|2.5e-06,PPR|PF01535.16|0.00023,PPR_1|PF12854.3|0.0017,PPR_1|PF12854.3|1.3e-06,PPR_1|PF12854.3|0.00033,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|0.58,PPR_3|PF13812.2|0.041 S_Transcript_296597:486-827(-)
NTLLNGLSSVGLMREAAGLLDQMKGRGIVPNAITYNISVSGYAKMGNTKECIRLYCEMVCRGFAPTTGVYNRLIHQFVQLGKMNQATELMNEMQVRHLIELVCNSCRRNSGKC*

Click here to download the sequence:
Link to NCBI Protein BLAST