Transcript Information: S_Transcript_296686.p1


Annotated TAIR IDAT5G57560.1
Annotated Gene NameXyloglucan endotransglucosylase/hydrolase family protein
Annotated Gene Symbol(s)TCH4, XTH22
Annotation TypeOrtholog
Chromosome Positionchr5:23307296-23308235 | Reverse length=284
E-Value3.7E-156
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1309413217859
Replicate 22.5956223008841
Replicate 31.4677610031931
Condition 2: 8 Hour
Replicate 10.44274166748373
Replicate 20.38705620483956
Replicate 30.73757258148724
Condition 3: 24 Hour
Replicate 10.37793916073692
Replicate 20.94105792012515
Replicate 30.61091457036613


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_296686.p1 GENE.S_Transcript_296686~~S_Transcript_296686.p1 ORF type:complete len:289 (+),score=46.46,Glyco_hydro_16|PF00722.17|1.7e-65,XET_C|PF06955.8|1e-22 S_Transcript_296686:85-951(+)
ATGGCTGCTCTTTCTGCTACTTCCTTCCTCTTTAATGTCCTCCTACTTGCCTCTTTCATTGCCGCGGCTTCTGCTGCTGGCAACTTGTATCAGAATTTTGACCTCACCTGGGGCGATGGTCGTGCCAAGATCCTGAACAATGGCCAGCTCCTCACCCTCTCCCTTGACAAGACCTCTGGCTCCGGTTTCCAGTCTAAGAACCAATACCTCTTTGGGAAGATCGACATGCAGCTCAAGCTTGTTCCTGGCAACTCTGCTGGCACCGTTACTGCCTACTATTTATCTTCCCAAGGACCTACCCATGATGAGATAGACTTCGAATTCTTGGGCAACGTCACTGGTCAGCCCTACACACTCCACACCAACGTTTTCAGCCAAGGCAAAGGTGGTCGGGAGCAACAGTTCCGCCTCTGGTTTGACCCCACTGCTGACTTCCACACCTATGCTATCCTGTGGAACCCACAAAGAATTATATTTTCAGTAGACGGCACACCCATCAGAGAATTCAGGAACTTGGAATCCATGGGAGTCCCTTTCCCAAAGAACCAGCCAATGAGAATATATTCAAGCCTCTGGAATGCAGACGACTGGGCAACCCAAGGCGGGAGGGTCAAGACAGACTGGAGCAAGGCTCCATTTACAGCTTCTTACAGGAACTTTAATGCTAATGCATGTGTTTGGTCCAATGGCAAATCCTCTTGCAGGGGCTCTGCCTCTGCCTCTGCCTGGATGAACCAGCAACTCGATGCCTCAAGCCAAAATAGGCTGCGATGGGTGCAGAAGAACTTCATGATATACAACTACTGCACTGACACAAAAAGGTTTCCCCAGGGCCTTCCTAAAGAATGCACAGTCTCCAAGTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_296686.p1 GENE.S_Transcript_296686~~S_Transcript_296686.p1 ORF type:complete len:289 (+),score=46.46,Glyco_hydro_16|PF00722.17|1.7e-65,XET_C|PF06955.8|1e-22 S_Transcript_296686:85-951(+)
MAALSATSFLFNVLLLASFIAAASAAGNLYQNFDLTWGDGRAKILNNGQLLTLSLDKTSGSGFQSKNQYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNVTGQPYTLHTNVFSQGKGGREQQFRLWFDPTADFHTYAILWNPQRIIFSVDGTPIREFRNLESMGVPFPKNQPMRIYSSLWNADDWATQGGRVKTDWSKAPFTASYRNFNANACVWSNGKSSCRGSASASAWMNQQLDASSQNRLRWVQKNFMIYNYCTDTKRFPQGLPKECTVSKF*

Click here to download the sequence:
Link to NCBI Protein BLAST