Transcript Information: S_Transcript_296779.p1


Annotated TAIR IDAT5G41270.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: RNAse P, Rpr2/Rpp21 subunit (InterPro:IPR007175); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16507797-16508813 | Forward length=258
E-Value9E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2435981885598
Replicate 20.61858288479014
Replicate 30.1723620194729
Condition 2: 8 Hour
Replicate 12.7902379854193
Replicate 21.6726615805403
Replicate 30.79685411607407
Condition 3: 24 Hour
Replicate 10.61247336889516
Replicate 20.42362264628687
Replicate 31.4143202470159


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_296779.p1 GENE.S_Transcript_296779~~S_Transcript_296779.p1 ORF type:3prime_partial len:107 (+),score=21.14,Rpr2|PF04032.12|1.2e-05 S_Transcript_296779:497-814(+)
ATGGGCAAGCGAGGAGGAGGTGCAACAACATCCTCCTCATTTGGGCTTCTTCACACTCGCACACAGCTCTCTCTCAGAGAAGAAACCACTGGGAGAAAGCAATCCCACAATCCCAAATCCATATTGAAACTCAAGCACCTCCAGAATTTAGCTCAGTGGGCTGCCTCTGATCCCTCTTCGGGTTCCTTCTATGGTCGCCGTTTCGCTGAGTTTGGCGTGGTTTTGGGGATTTCCCCTAACCATTCTCTCTTTCCTTGCCAGAGATGCGAAGTTATTCTTCAACCTGGTTTCAACTGTAGTGTCAGAATTGAAAAAAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_296779.p1 GENE.S_Transcript_296779~~S_Transcript_296779.p1 ORF type:3prime_partial len:107 (+),score=21.14,Rpr2|PF04032.12|1.2e-05 S_Transcript_296779:497-814(+)
MGKRGGGATTSSSFGLLHTRTQLSLREETTGRKQSHNPKSILKLKHLQNLAQWAASDPSSGSFYGRRFAEFGVVLGISPNHSLFPCQRCEVILQPGFNCSVRIEKN

Click here to download the sequence:
Link to NCBI Protein BLAST