Transcript Information: S_Transcript_297151.p1


Annotated TAIR IDAT5G14820.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:4792072-4793868 | Reverse length=598
E-Value3E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23551328526708
Replicate 20
Replicate 30.65284021534869
Condition 2: 8 Hour
Replicate 10
Replicate 20.79192384565404
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.44640786557728


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_297151.p1 GENE.S_Transcript_297151~~S_Transcript_297151.p1 ORF type:5prime_partial len:113 (-),score=18.84,PPR_2|PF13041.2|3.1e-09,PPR_2|PF13041.2|0.00023,PPR|PF01535.16|0.0062,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|1.5e+03,PPR_3|PF13812.2|0.04,PPR_3|PF13812.2|0.00036,PPR_3|PF13812.2|1.9e+03,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|7.7e-06 S_Transcript_297151:511-849(-)
GTAAATCTGAAGTTTCTGAAATCCTACTTGTTGGCCGGAAATAGTGAAATGTGTTTTGCCGTTTGGGATGAGATGGTTCAGAGGGGTTGCTGCCCTGACGAGAACTCCTACACTATTCTCATCGGAGGGCTTATAAGACAAGGGAGATCAGAGGAGGTGTGTAAATATGTAGAGGAAATGATCAATAAAGGCATGAGAGTTCCACAACTCGATTTCAACAAGTTTGTCTCTGATTTCTCTAGGATCGGTCGGCCCAACATACTCGAGGAGCTAGCTCGAAAGATGAGGCTGTCTGGTAAATCTGAAGTTTCTGAAATCCTACTTGTTGGCCGGAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_297151.p1 GENE.S_Transcript_297151~~S_Transcript_297151.p1 ORF type:5prime_partial len:113 (-),score=18.84,PPR_2|PF13041.2|3.1e-09,PPR_2|PF13041.2|0.00023,PPR|PF01535.16|0.0062,PPR|PF01535.16|1.3e-05,PPR|PF01535.16|1.5e+03,PPR_3|PF13812.2|0.04,PPR_3|PF13812.2|0.00036,PPR_3|PF13812.2|1.9e+03,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|7.7e-06 S_Transcript_297151:511-849(-)
VNLKFLKSYLLAGNSEMCFAVWDEMVQRGCCPDENSYTILIGGLIRQGRSEEVCKYVEEMINKGMRVPQLDFNKFVSDFSRIGRPNILEELARKMRLSGKSEVSEILLVGRK*

Click here to download the sequence:
Link to NCBI Protein BLAST