Transcript Information: S_Transcript_29740.p1


Annotated TAIR IDAT5G51330.1
Annotated Gene NameSWITCH1
Annotated Gene Symbol(s)SWI1, DYAD
Annotation TypeOrtholog
Chromosome Positionchr5:20858752-20861680 | Reverse length=639
E-Value2E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.957091283871
Replicate 216.469406289413
Replicate 314.397950906312
Condition 2: 8 Hour
Replicate 118.321814216128
Replicate 216.655098584907
Replicate 317.112722725126
Condition 3: 24 Hour
Replicate 114.196976594491
Replicate 212.996350702734
Replicate 312.890139394164


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_29740.p1 GENE.S_Transcript_29740~~S_Transcript_29740.p1 ORF type:3prime_partial len:497 (+),score=92.65 S_Transcript_29740:184-1488(+)
ATGAGGGTAATGCCGAAAAGGCTAAACATATTGGGATCAGTAGGAGATGCTGCTCAAAGCACTCCTTTGCCTGCACGTCTCGCTATCACTCCCAAATTATCGATTCACGATATTGAAGAGGGTGAATTTTATGAGATTGATCATTCCAGGCTACCTGCTGGAATCCCTGCCATGCTTCGTGTCGTTCGTGTTGTTCTGGTAACTTGCAAAGGTAAGCTGGGTGTGTCTTTGAGATATCCTAGCTCTCAGTCCCTTGAAGCATGCTTTAGCAATCCTGAGCTTGTAACTCGTAGGGCCAAAGTGTTCCCTCAATTGGATGAGAAAGTCGACATCCCAGCAAGGCTTGCTGTTAAGGTTCTTGGGCGCCAAATCACATCTGAGGAATTTGTGGTGTCCAAATACTCCAAGTTCTTCTGGGTGAATAATTGTTTTAAGATGGAGCAGGTACTCTCGCCCATATCAGTTTGTTATGCTGATAATAACGCAGCAGATTTTCAAGCTAAGAATGGGACGTTGTCAGTCAGACTCCGATGCCATGAACCCAAGGGCAAGGGTACTAACCATAGAAAAGGTGTCTATTGTCTGGAGCCCAGCTCCCATCAAGAGACATTGAGTGAATCGTACAGAGAAGTTAAAATGACTGTAAAAGAAGAGGGAAATGATGAAATGAGTGACAAAAAAATTATTCAATACACCAGGAAGAGGAAGCGTGGTAGACCTTCTCTTGGTCAAAACCAGAAGAGAAACCATAGTCCAAAGCCTAAGCCTATTGAGCAGAAAGCTGTAATCAAGGTAAAGAAAGAGCACGAATATGTAGACAGGTGGCCTGTGAAGAGGTATGAAGCAGCAGCAAAGGACTTGTCAGAGGTTTTAAAGGCTAAAGGGGCAGTTCATGGGAACCCAATTTCACGTTTTGAGCTGAGGGCTCTAGCTAGGAATACAATTGGTGATACGGGCCTGTTAGACCATCTGCTGAAGCACCTTGCAGGGAAAGTGGTTCCTGGTGGCAATGAACGCCTGCGTAGGCGGTGTGATCCAGAAGGTAAAATGGAGTACTGGCTTGAAAGTGCAGATCTTGCTGATATAAGGAAGGAAGCTGGAATACAAGATCCATACTGGATACCTCCCGCAGGATGGAAGCCTGGAGACTGCCTTGGCACACATGATTGCCGTTGCGATCAACAAGTAAGGCTACTTAAGGAAGAATTGAGCAGCATGAGAAGACACATAGAAGAGCTGAAATCCAAGAATAATCATGAGCAGGCAATCACTGTAGTACAGCCAGGTAGTGTGGCATCTTTTGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_29740.p1 GENE.S_Transcript_29740~~S_Transcript_29740.p1 ORF type:3prime_partial len:497 (+),score=92.65 S_Transcript_29740:184-1488(+)
MRVMPKRLNILGSVGDAAQSTPLPARLAITPKLSIHDIEEGEFYEIDHSRLPAGIPAMLRVVRVVLVTCKGKLGVSLRYPSSQSLEACFSNPELVTRRAKVFPQLDEKVDIPARLAVKVLGRQITSEEFVVSKYSKFFWVNNCFKMEQVLSPISVCYADNNAADFQAKNGTLSVRLRCHEPKGKGTNHRKGVYCLEPSSHQETLSESYREVKMTVKEEGNDEMSDKKIIQYTRKRKRGRPSLGQNQKRNHSPKPKPIEQKAVIKVKKEHEYVDRWPVKRYEAAAKDLSEVLKAKGAVHGNPISRFELRALARNTIGDTGLLDHLLKHLAGKVVPGGNERLRRRCDPEGKMEYWLESADLADIRKEAGIQDPYWIPPAGWKPGDCLGTHDCRCDQQVRLLKEELSSMRRHIEELKSKNNHEQAITVVQPGSVASFV

Click here to download the sequence:
Link to NCBI Protein BLAST