Transcript Information: S_Transcript_297786.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value3E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.12840872051194
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_297786.p1 GENE.S_Transcript_297786~~S_Transcript_297786.p1 ORF type:complete len:166 (-),score=27.47,zf-RVT|PF13966.2|1.2e-18,zf-RVT|PF13966.2|3.4e+03 S_Transcript_297786:660-1157(-)
ATGATCATTCCTAATTCAGCTAGTTGGATGGTCCGGAAGGTTATCCAGGCACGAGAGATTAAAGAGTTTATCAGTGATTGGGAGGCAGTGATGGCTCAAGGGAAATTTTCAATAAGGAAAGTCTATTTGTCTCCACTAGAGGATTTACCGAAAGTCCCTTGGAGTATATCAAATGGAGCTACACCAAGAGCAGTGATAACCCTGTGGATGGTGTTGTGGAGAAGGCTGTTGACAGCAGATAGACTACAGAAATGGGGTATGATGGTTGATCCTACTTGTGTTTTTTGTAAGAATACAGATGAAACACTTGATCACTTGCTGTTCGAGTGTGATTTTGCTCAAGACCTTTGGAGAAAGGTGTTGGATTGGCATGGCATACCTCATACAGGCACAATATCGGAAGTTACTGCAAAGGTGGCAAAAAAGAAGAATAGACAGGCATGTTCTTTTGTGATGGCTGTTTCTGAGACAGTACATGCTCCGTGGCTAGAGAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_297786.p1 GENE.S_Transcript_297786~~S_Transcript_297786.p1 ORF type:complete len:166 (-),score=27.47,zf-RVT|PF13966.2|1.2e-18,zf-RVT|PF13966.2|3.4e+03 S_Transcript_297786:660-1157(-)
MIIPNSASWMVRKVIQAREIKEFISDWEAVMAQGKFSIRKVYLSPLEDLPKVPWSISNGATPRAVITLWMVLWRRLLTADRLQKWGMMVDPTCVFCKNTDETLDHLLFECDFAQDLWRKVLDWHGIPHTGTISEVTAKVAKKKNRQACSFVMAVSETVHAPWLEK*

Click here to download the sequence:
Link to NCBI Protein BLAST