Transcript Information: S_Transcript_298546.p1


Annotated TAIR IDAT1G11910.1
Annotated Gene Nameaspartic proteinase A1
Annotated Gene Symbol(s)APA1, ATAPA1
Annotation TypeOrtholog
Chromosome Positionchr1:4017119-4019874 | Reverse length=506
E-Value5E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.319313675137
Replicate 237.384171194678
Replicate 330.99404258494
Condition 2: 8 Hour
Replicate 173.009843238518
Replicate 265.872665439195
Replicate 369.572558155148
Condition 3: 24 Hour
Replicate 161.2870342375
Replicate 258.07601716439
Replicate 353.071385102432


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_298546.p1 GENE.S_Transcript_298546~~S_Transcript_298546.p1 ORF type:internal len:144 (-),score=29.43,Asp|PF00026.19|7.7e-51,TAXi_N|PF14543.2|1.9e-06 S_Transcript_298546:1-429(-)
TATATTAAGAAGTCATTGGGGAGATATGGTCTCGGTAACAACATTGGGGGTTATGATGATTCGGATATCATTCCTTTGAAGAACTATTTGGATGCTCAGTACTTTGGTGAGATTGGTATTGGTACTCCTCCACAGAAGTTCACTGTGATTTTCGACACTGGGAGCTCCAATCTCTGGGTTCCTTCCTCTAAGTGTTATTTTTCCATTGCTTGTCTTTTCCACTCCAAGTACAATTCCAGGCGATCAAGTTCTTATACTAAAAATGGAACATCTGCTGCCATTCATTATGGTACTGGAGCCATTTCAGGATACTTTAGTGAAGATCATGTTACAGTGGGAGACCTTGTTGTTGAGAATCAGGACTTTATTGAAGCAACAAGAGAGCCTAGTCTCACATTTGTGGTAGCTAAGTTTGACGGTATACTTGGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_298546.p1 GENE.S_Transcript_298546~~S_Transcript_298546.p1 ORF type:internal len:144 (-),score=29.43,Asp|PF00026.19|7.7e-51,TAXi_N|PF14543.2|1.9e-06 S_Transcript_298546:1-429(-)
YIKKSLGRYGLGNNIGGYDDSDIIPLKNYLDAQYFGEIGIGTPPQKFTVIFDTGSSNLWVPSSKCYFSIACLFHSKYNSRRSSSYTKNGTSAAIHYGTGAISGYFSEDHVTVGDLVVENQDFIEATREPSLTFVVAKFDGILG

Click here to download the sequence:
Link to NCBI Protein BLAST