Transcript Information: S_Transcript_298605.p1


Annotated TAIR IDAT5G47020.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11700.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19082005-19089800 | Forward length=1421
E-Value1E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8305238944833
Replicate 22.3346867256629
Replicate 32.3419347407747
Condition 2: 8 Hour
Replicate 13.1593170840197
Replicate 23.3143479466262
Replicate 34.2857259734883
Condition 3: 24 Hour
Replicate 12.5427906708628
Replicate 21.9186295514368
Replicate 32.0017495559616


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_298605.p1 GENE.S_Transcript_298605~~S_Transcript_298605.p1 ORF type:3prime_partial len:189 (+),score=34.87 S_Transcript_298605:289-852(+)
ATGCGAATGCCTCCTGCGCTCCCTCATTGGTATCTTCATTGCTGTCTTTTCTTGGTGCAGCTTTTGCTACTGGTGTTTAGTGGTGTTTGTGGCGAGTACACAAGTGGGGAAAATGGCACTGAAGTTAGGTTTGGTGATAAAGCTTGGCAGCTTCCTAGTGACATTTCTTCTGATAGCAGAATTTCTAGATATGAGGACAGTTCAGTATATATCTCCTCATCAGTAAATTGGGTGTCTTGTGAGGACCTTGCGGGTGTTGGATCATTCAATACTACATGCCTTATCAATTCAAATTTACATTTGAATTCCAGTATTTATGCACTTGGTATGGGGAACTTAGAGATACTTCCTCATGTTTCAATTGTTTGCCCCGTAGAAGGTTGCTCTATCAGCGTTAATGTATCTGGGAATGTGAAATTGGGACCAAATGCTTCTATCATTGGTTGTTCTGTTGTTATTGCTTCCCATAGCTTGAGTGTGGGGCATAATGCTTCTATAAATACCACATCTCTCGGAGGAAGCCCACCTTCACAAACTAGTGGCACTCCTGTTGGCTATGATGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_298605.p1 GENE.S_Transcript_298605~~S_Transcript_298605.p1 ORF type:3prime_partial len:189 (+),score=34.87 S_Transcript_298605:289-852(+)
MRMPPALPHWYLHCCLFLVQLLLLVFSGVCGEYTSGENGTEVRFGDKAWQLPSDISSDSRISRYEDSSVYISSSVNWVSCEDLAGVGSFNTTCLINSNLHLNSSIYALGMGNLEILPHVSIVCPVEGCSISVNVSGNVKLGPNASIIGCSVVIASHSLSVGHNASINTTSLGGSPPSQTSGTPVGYDG

Click here to download the sequence:
Link to NCBI Protein BLAST