Transcript Information: S_Transcript_299016.p1


Annotated TAIR IDAT3G58100.1
Annotated Gene Nameplasmodesmata callose-binding protein 5
Annotated Gene Symbol(s)PDCB5
Annotation TypeOrtholog
Chromosome Positionchr3:21515397-21516329 | Reverse length=180
E-Value4.9E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9996418041312
Replicate 24.7186312926477
Replicate 36.6095354750476
Condition 2: 8 Hour
Replicate 16.5332120624743
Replicate 24.78473063393
Replicate 37.3927795161785
Condition 3: 24 Hour
Replicate 13.0305040680593
Replicate 22.8821032062407
Replicate 32.9158432838284


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_299016.p1 GENE.S_Transcript_299016~~S_Transcript_299016.p1 ORF type:complete len:173 (+),score=37.20,X8|PF07983.9|1.7e-18,X8|PF07983.9|7.9e+03 S_Transcript_299016:234-752(+)
ATGGAAAACTCCTTTTTGTTCACTTTTATTACTACCCTTTTTACCCTCTTCATTGTATCCACCTCTGAAAACAGTGGTGCAGTGATTCAGCAACAGATGCTATGGTGTGTTGCCAAGAACAATGCTGAAGACTCAGCCCTGCAGCAGGCCTTGGACTGGGCTTGTGGGCCTGGTGGGGCTGATTGTGGACCGATTCAACAAGGTGGGCCTTGTTATGATACCAATGACTTGATTGGTATGGCTTCTTATGCTTTCAATGATTATTGTCTTAAACATGGCATGACTGATGATACTTGCAACTTTAGTAACACTGCTGCTCTTACTGCTCTTGACCCTAGTCATGATAAGTGTAAATTTGCATCAAGCTCGTTCTCTACTGGGAATTCTTCCACCCCTTCGACTGCTGGAATTCTCCCAGGTAGTGAAGATATGAGTGGGAGTAGTCAGCTGGCTTCAATAGGGTTTTGGACACTAGCCCTCCCGAACCTGCTCGTCACAGTCTTCACATTTTTCCTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_299016.p1 GENE.S_Transcript_299016~~S_Transcript_299016.p1 ORF type:complete len:173 (+),score=37.20,X8|PF07983.9|1.7e-18,X8|PF07983.9|7.9e+03 S_Transcript_299016:234-752(+)
MENSFLFTFITTLFTLFIVSTSENSGAVIQQQMLWCVAKNNAEDSALQQALDWACGPGGADCGPIQQGGPCYDTNDLIGMASYAFNDYCLKHGMTDDTCNFSNTAALTALDPSHDKCKFASSSFSTGNSSTPSTAGILPGSEDMSGSSQLASIGFWTLALPNLLVTVFTFFL*

Click here to download the sequence:
Link to NCBI Protein BLAST