Transcript Information: S_Transcript_299361.p1


Annotated TAIR IDAT2G03820.1
Annotated Gene Namenonsense-mediated mRNA decay NMD3 family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:1165149-1166699 | Reverse length=516
E-Value5E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60829717108984
Replicate 20.63036541592899
Replicate 30.94848357001374
Condition 2: 8 Hour
Replicate 10.24371874648152
Replicate 21.1505522157574
Replicate 30.48721937382815
Condition 3: 24 Hour
Replicate 10.62413952830269
Replicate 20.51802997888794
Replicate 31.2971337122631


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_299361.p1 GENE.S_Transcript_299361~~S_Transcript_299361.p1 ORF type:3prime_partial len:175 (+),score=34.33,NMD3|PF04981.9|6.5e-38 S_Transcript_299361:565-1086(+)
ATGGACCAAGATTCCGATATGTTTTTTGTACATGATCACACTATGGGCACTGTTCTTTGCTGCAAATGTGGTATTCTTATGCAACCAAATGCTGCCAACATGTGTGTCAAGTGTTTTTGTTCGGAAGTCAACATTACTGAAGGCTTGCTTAAGCATGTCACAGTCTTGTTTTGCCCTGATTGTAAGACTTACTTGCAGCCTTCAAAGACCCGGATCAAAGCCGAGCTACAATCCAAGGAACTTCTTACATTCTGCTTGAGGAAGCTGAATTTGGATAAAGCCAAGGTTACATTGGTGCATGCTGAGTTTGTGGAAACTGAGGAACATTCGAAGAGACTTAAAGTTAAAGTGACAATTCAGAAAGAAGTTCTTCCTGGGGCTGTGTTACAGCAATGTTATCAGGTTGAGTATGTTGTGCACCATCACATGTGTGATGGGTGTTCTAGGGTGCAGGCGAATCCCGATCAGTGGGTGGCAGTTGTTCAACTTAGGCAGCATGTCAGTCACAAGAGGACTTTCTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_299361.p1 GENE.S_Transcript_299361~~S_Transcript_299361.p1 ORF type:3prime_partial len:175 (+),score=34.33,NMD3|PF04981.9|6.5e-38 S_Transcript_299361:565-1086(+)
MDQDSDMFFVHDHTMGTVLCCKCGILMQPNAANMCVKCFCSEVNITEGLLKHVTVLFCPDCKTYLQPSKTRIKAELQSKELLTFCLRKLNLDKAKVTLVHAEFVETEEHSKRLKVKVTIQKEVLPGAVLQQCYQVEYVVHHHMCDGCSRVQANPDQWVAVVQLRQHVSHKRTFF

Click here to download the sequence:
Link to NCBI Protein BLAST