Transcript Information: S_Transcript_29952.p1


Annotated TAIR IDAT3G56370.1
Annotated Gene NameLeucine-rich repeat protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20899403-20902390 | Reverse length=964
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.7325249995442
Replicate 27.9507588651824
Replicate 36.9302273168355
Condition 2: 8 Hour
Replicate 112.239110048539
Replicate 212.242500333649
Replicate 312.977718305702
Condition 3: 24 Hour
Replicate 14.5304583830596
Replicate 27.0737153174637
Replicate 36.4738306994651


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_29952.p1 GENE.S_Transcript_29952~~S_Transcript_29952.p1 ORF type:complete len:974 (+),score=213.88,LRR_8|PF13855.2|0.0019,LRR_8|PF13855.2|5.6e-06,LRR_8|PF13855.2|4e-08,LRR_8|PF13855.2|0.00027,LRR_8|PF13855.2|2.4e-07,LRR_8|PF13855.2|1,LRR_8|PF13855.2|2.4e-09,LRR_8|PF13855.2|6.3e-08,LRR_8|PF13855.2|0.03,LRR_8|PF13855.2|1.5e+03,Pkinase_Tyr|PF07714.13|4.7e-43,Pkinase|PF00069.21|1.5e-41,LRR_4|PF12799.3|0.069,LRR_4|PF12799.3|0.15,LRR_4|PF12799.3|0.00094,LRR_4|PF12799.3|0.011,LRR_4|PF12799.3|0.2,LRR_4|PF12799.3|0.26,LRR_4|PF12799.3|0.97,LRR_4|PF12799.3|0.00037,LRR_4|PF12799.3|0.0042,LRR_4|PF12799.3|3.1,LRR_4|PF12799.3|0.28,LRR_4|PF12799.3|5.8e+02,LRR_1|PF00560.29|53,LRR_1|PF00560.29|0.42,LRR_1|PF00560.29|1.1e+02,LRR_1|PF00560.29|32,LRR_1|PF00560.29|3.3,LRR_1|PF00560.29|1.2,LRR_1|PF00560.29|1.6e+02,LRR_1|PF00560.29|3.1e+02,LRR_1|PF00560.29|23,LRR_1|PF00560.29|53,LRR_1|PF00560.29|0.94,LRR_1|PF00560.29|6.2,LRR_1|PF00560.29|1.2e+02,LRR_1|PF00560.29|2.3e+02,LRR_1|PF00560.29|4e+02,LRR_1|PF00560.29|42,LRR_1|PF00560.29|26,LRRNT_2|PF08263.8|2.4e-11 S_Transcript_29952:553-3474(+)
ATGAAGAAGCTGGGTATAATCGTTTGCACTTTTCTTGTTATTCTGGGTCTGGGATTACCTTGTACAAGAAGCTCAATAAGCCCATCTTTGAATGATGATGTATTGGGGCTAATTGTATTCAAAGCAGACATTCAAGACCCAAATGGGAAACTAACAACATGGAATGAAGATGATGATAGCCCTTGTAATTGGGTTGGGATCCAATGTAACCCTAGAAACAAGAGGGTTTCTGAGCTCAATCTTGATGGGTTTTCATTATCAGGCAAGCTTGGACGTGGCCTTTTACAGCTTCAATCACTTAGGAAGCTCTCACTTTCCAAAAACAACCTCACTGGTACTCTTACTTCATCTCTTCTTAGGCTCTCAAACCTTAGAATCCTTGATTTGAGCGACAATAACTTATCTGGGGAGTTGGGTTCTGATTTTTTCGACCAATGTGGGCCCTTGAGAACTGTTTCTTTGGCTGGCAACAAGTTCTCAGGACAGATCCCTGATAGTTTGAGCTCTTGTGTTGGTTTATCTGTGCTTAACTTGTCAAACAACCAGTTTTCTGGGGATCTTCCTTCTGGGATTTGGGATTTACATGGGCTAAGGTCACTTGATCTGTCTTCTAACATGTTGAGTGATGAAATCCCAAAAGGGATTGATGGTTTGTATAATTTGAGAAGTATTAATTTGAGTGGTAACAAGCTTACTGGGTCTGTTCCTGCTGATGTTGGTGGGTGTTCTTTGTTGAGATCACTTGATTTTAGTGAGAATTTGCTATCTGGGAATTTGCCATCTTCATTATTGAACTTGAGTTTTTGTGGGGTTGTTGATTTGAGAGGGAATTCACTTGAGGGTCAAGTTCCTGCTTGGATTGGAGGGTTGAGAGCCCTTGAGAGTCTTGATCTTTCAGCTAATAACTTGACTGGTGAATTGCCCACTTCTATGGGGAGCCTTAGGTCATTAAAGTTGTTGAATATGTCAATCAATGGTTTGAGTGGAAACTTGCCTGAATCTATGGTTGGTTGTGCTAGTCTTGAGGTGTTAGACTTCAGGCAGAACTTGTTGACTGGTGATTTGCCTAAGTGGGTTTTCAAGGTTGGTTTGCAAGAAGTTCTTCTCTCAGAGAATAAGTTTGGTGGAATCATGAATGATTCTATCAATTCAGCTGAACCCATCTCATATAAGAGCCTACAAGTGTTGGATTTGTCTCAAAATGAGTTTACTGGGGCTATTCCTTCCTCTATTGGGGGTTTCACCAGCTTAGAGTTGTTGAATTTGTCTAAGAACTCTCTGACTGGCTCTATTCCTGGAAATGTTGGAGAATTGAAAGCATTGCATGTTCTTGATTTGAGTGAGAATCAGTTGAATGGGAGCATCCCTTCTGAAATTGGAGGAGCTACTTCTCTAAGAGATTTGATACTCCAGAAGAACTTCATTCAGGGGAATATACCAACCTCACTTGAGCATTGCTCTTCATTGTCAGACTTGATCCTATCACATAATAGCCTTGAGGGACCAGTACCTGTAGCTCTATCAAAACTTGATAGTCTACAAGTTGTGGACCTTTCATTCAATGACCTAAGTGGGACTCTACCAAAACAACTAGCAAATCTCCAACATCTTCTTTCTTTCAATGTTTCGAATAACAATCTCGAAGGTGAACTGCCTGGCGGTTTCTTTAACACCATATCTCCCTCCTCTGTCTCGGGAAATCCTGCTCTTTGTGGCTCGGCTACAAAGAGATCTTGTGCAGCTGTCCTTCCTAAACCCATTGTCTTAAATCCAAACTCCACTTCTGACTCCTCCTCGGGTACTTCTGTGGCTCCTACACTTGCTCGCAAACGAAAAATCCTCAGCATATCTGCGCTCATTGCAATTGGTGCGGCTGCTGCTATTGTAATTGGTGTGATTGCCATCACAGTTCTCAATCTTCGTGTCAGGGCCTCTGCATCTCGTTCTGCAGCTGCTCTTGCACTGTCTAATGGCGATGATTTCAGTCGTTCTGCGTCAACAGATGCCAATTCTGGAAAGCTAGTCATGTTCTCAGGCGAGCCTGATTTTAGTATGGGGACCCATGCTCTACTAAACAAGGATTGTGAGCTTGGTCGTGGGGGATTTGGGGCTGTCTACAGAACTGTTCTTCAAAACGGTCGCCCTGTTGCCATAAAAAAGCTCACTGTTTCGAGTCTGGTCAAGTCTCAGGATGATTTTGAGCGAGAGGTTAAGAAACTGGGAAAAATCCGGCACCATAATCTTGTTACGCTCGAAGGGTATTATTGGACTCCATCACTGCAACTCCTAATTTACGAATTTGTTTCTGGTGGAAGTTTGCATAAGCGTCTTCATGAAGGAAAAAGCGGGAACTTTCTTTCATGGAACGAGAGATTCAATATAATTCTTGGAATGGCCAAAGGGTTATCTCACTTGCATCAATTGAATGTCATCCACTACAATCTCAAATCGAGCAACATTCTCATAGATGGCAACGGTGAACCTAAAGTGGGAGATTTTGGCTTAGCAAGGCTGTTGCCAATGCTGGACCGATACATATTAAGCAGCAAAATTCAGAGCGCACTTGGTTACATGGCACCTGAATTTGCCTGCATGACAGTGAAAATTACAGAAAAATGCGATGTCTATGGTTTCGGAATCCTGGCATTGGAGGTGGTGACGGGGAAGAGACCTGTCGAGTACATGGAGGATGACGTGGTCGTTCTGTGCGAGATGGTCAGGGGAGCACTGGAAGAAGGGCGAGTGGAAGAATGTGTTGATGAGAGACTCCAAGGTAATTTCCCAGCTGAAGAAGCCATTCCAGTGATGAAATTAGGGCTTATTTGCACATCACAGGTGCCATCAAACAGGCCTGATATGAGAGAAGTGGTTAGCATACTGGAGTTGATCAGATGTCCCTCGGAAGGCCTAGAATCAGGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_29952.p1 GENE.S_Transcript_29952~~S_Transcript_29952.p1 ORF type:complete len:974 (+),score=213.88,LRR_8|PF13855.2|0.0019,LRR_8|PF13855.2|5.6e-06,LRR_8|PF13855.2|4e-08,LRR_8|PF13855.2|0.00027,LRR_8|PF13855.2|2.4e-07,LRR_8|PF13855.2|1,LRR_8|PF13855.2|2.4e-09,LRR_8|PF13855.2|6.3e-08,LRR_8|PF13855.2|0.03,LRR_8|PF13855.2|1.5e+03,Pkinase_Tyr|PF07714.13|4.7e-43,Pkinase|PF00069.21|1.5e-41,LRR_4|PF12799.3|0.069,LRR_4|PF12799.3|0.15,LRR_4|PF12799.3|0.00094,LRR_4|PF12799.3|0.011,LRR_4|PF12799.3|0.2,LRR_4|PF12799.3|0.26,LRR_4|PF12799.3|0.97,LRR_4|PF12799.3|0.00037,LRR_4|PF12799.3|0.0042,LRR_4|PF12799.3|3.1,LRR_4|PF12799.3|0.28,LRR_4|PF12799.3|5.8e+02,LRR_1|PF00560.29|53,LRR_1|PF00560.29|0.42,LRR_1|PF00560.29|1.1e+02,LRR_1|PF00560.29|32,LRR_1|PF00560.29|3.3,LRR_1|PF00560.29|1.2,LRR_1|PF00560.29|1.6e+02,LRR_1|PF00560.29|3.1e+02,LRR_1|PF00560.29|23,LRR_1|PF00560.29|53,LRR_1|PF00560.29|0.94,LRR_1|PF00560.29|6.2,LRR_1|PF00560.29|1.2e+02,LRR_1|PF00560.29|2.3e+02,LRR_1|PF00560.29|4e+02,LRR_1|PF00560.29|42,LRR_1|PF00560.29|26,LRRNT_2|PF08263.8|2.4e-11 S_Transcript_29952:553-3474(+)
MKKLGIIVCTFLVILGLGLPCTRSSISPSLNDDVLGLIVFKADIQDPNGKLTTWNEDDDSPCNWVGIQCNPRNKRVSELNLDGFSLSGKLGRGLLQLQSLRKLSLSKNNLTGTLTSSLLRLSNLRILDLSDNNLSGELGSDFFDQCGPLRTVSLAGNKFSGQIPDSLSSCVGLSVLNLSNNQFSGDLPSGIWDLHGLRSLDLSSNMLSDEIPKGIDGLYNLRSINLSGNKLTGSVPADVGGCSLLRSLDFSENLLSGNLPSSLLNLSFCGVVDLRGNSLEGQVPAWIGGLRALESLDLSANNLTGELPTSMGSLRSLKLLNMSINGLSGNLPESMVGCASLEVLDFRQNLLTGDLPKWVFKVGLQEVLLSENKFGGIMNDSINSAEPISYKSLQVLDLSQNEFTGAIPSSIGGFTSLELLNLSKNSLTGSIPGNVGELKALHVLDLSENQLNGSIPSEIGGATSLRDLILQKNFIQGNIPTSLEHCSSLSDLILSHNSLEGPVPVALSKLDSLQVVDLSFNDLSGTLPKQLANLQHLLSFNVSNNNLEGELPGGFFNTISPSSVSGNPALCGSATKRSCAAVLPKPIVLNPNSTSDSSSGTSVAPTLARKRKILSISALIAIGAAAAIVIGVIAITVLNLRVRASASRSAAALALSNGDDFSRSASTDANSGKLVMFSGEPDFSMGTHALLNKDCELGRGGFGAVYRTVLQNGRPVAIKKLTVSSLVKSQDDFEREVKKLGKIRHHNLVTLEGYYWTPSLQLLIYEFVSGGSLHKRLHEGKSGNFLSWNERFNIILGMAKGLSHLHQLNVIHYNLKSSNILIDGNGEPKVGDFGLARLLPMLDRYILSSKIQSALGYMAPEFACMTVKITEKCDVYGFGILALEVVTGKRPVEYMEDDVVVLCEMVRGALEEGRVEECVDERLQGNFPAEEAIPVMKLGLICTSQVPSNRPDMREVVSILELIRCPSEGLESG*

Click here to download the sequence:
Link to NCBI Protein BLAST