Transcript Information: S_Transcript_299628.p1


Annotated TAIR IDAT1G73710.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:27721190-27724165 | Forward length=991
E-Value1E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.68411750565937
Replicate 30.285933892769
Condition 2: 8 Hour
Replicate 10.16531310323359
Replicate 20.17342518325369
Replicate 30
Condition 3: 24 Hour
Replicate 10.16934018209763
Replicate 20.3513769236643
Replicate 30.586559172212


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_299628.p1 GENE.S_Transcript_299628~~S_Transcript_299628.p1 ORF type:internal len:129 (-),score=24.23,PPR_2|PF13041.2|3.4e-11,PPR_2|PF13041.2|5.8e-08,PPR_2|PF13041.2|1.3e-09,PPR|PF01535.16|3.6e-05,PPR|PF01535.16|2e-05,PPR|PF01535.16|4.1e-07,PPR|PF01535.16|1.2e+04,PPR_1|PF12854.3|0.00087,PPR_1|PF12854.3|4e-06,PPR_1|PF12854.3|2.8e-06,PPR_1|PF12854.3|3e+03,PPR_3|PF13812.2|0.031,PPR_3|PF13812.2|0.43,PPR_3|PF13812.2|0.00053,PPR_3|PF13812.2|7.2e+03 S_Transcript_299628:2-385(-)
GGCATGAGGAATTTTGGAACTTGGCCAGATGAATGCACGTATAATTCTATGATCCAAATGCTTGCTGGAGGTGATTTAGTGGATCAAGCAAAAGAAATTTTAATCCAAATGCAAGAACGTGGATTGAAACCACATTGCCAAACATTTTCTACTATGGTTGCTAGCTATGCACGACTAGGCTTGTTATCTGATGCCACAAACATGTTCCAAGACATGGTTCGGGTAGGACTGAAAGCAAATGTATTCGTTTTTGGGGCTTTGATTAATGGGTTTGCAGAAGCTGGTAGGACTGAAGAAGCTTTATATTGCTTTCAAAAGATGAAAGATGATGGAATCAGTGCAAACCAAATTGTCTTGACTTCACTTATGAAGACATATATTAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_299628.p1 GENE.S_Transcript_299628~~S_Transcript_299628.p1 ORF type:internal len:129 (-),score=24.23,PPR_2|PF13041.2|3.4e-11,PPR_2|PF13041.2|5.8e-08,PPR_2|PF13041.2|1.3e-09,PPR|PF01535.16|3.6e-05,PPR|PF01535.16|2e-05,PPR|PF01535.16|4.1e-07,PPR|PF01535.16|1.2e+04,PPR_1|PF12854.3|0.00087,PPR_1|PF12854.3|4e-06,PPR_1|PF12854.3|2.8e-06,PPR_1|PF12854.3|3e+03,PPR_3|PF13812.2|0.031,PPR_3|PF13812.2|0.43,PPR_3|PF13812.2|0.00053,PPR_3|PF13812.2|7.2e+03 S_Transcript_299628:2-385(-)
GMRNFGTWPDECTYNSMIQMLAGGDLVDQAKEILIQMQERGLKPHCQTFSTMVASYARLGLLSDATNMFQDMVRVGLKANVFVFGALINGFAEAGRTEEALYCFQKMKDDGISANQIVLTSLMKTYIK

Click here to download the sequence:
Link to NCBI Protein BLAST