Transcript Information: S_Transcript_29979.p1


Annotated TAIR IDAT4G37190.1
Annotated Gene NameLOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta tubulin, autoregulation binding site (InterPro:IPR013838), Misato Segment II, myosin-like (InterPro:IPR019605), Tubulin/FtsZ, N-terminal (InterPro:IPR019746); Has 345 Blast hits to 341 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 140; Plants - 55; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17507155-17509512 | Forward length=562
E-Value2.1E-243
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.143373639791
Replicate 213.716795609313
Replicate 314.728349656956
Condition 2: 8 Hour
Replicate 118.785764149769
Replicate 220.491202869662
Replicate 317.806758857401
Condition 3: 24 Hour
Replicate 113.734348814577
Replicate 213.733237837857
Replicate 314.355804608866


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_29979.p1 GENE.S_Transcript_29979~~S_Transcript_29979.p1 ORF type:complete len:571 (+),score=116.55,Misat_Tub_SegII|PF10644.5|4.8e-32,Tubulin_3|PF14881.2|1.4e-25 S_Transcript_29979:437-2149(+)
ATGAGAGAAGTACTCACTGTTCAAGTTGGAACTTTTGCCAATTTCATTGGTTCTCACTTTTGGAACTTCCAGGATGAATTACTTGGTTTGGCTGGTGATCCCGAGAGTGATCTTGCATTCAAGAATCATGGCTTAAACATGGATGTGCTGTATCGTACAGGAGAAACTCAGGAGGGGTTTCTTACTTATACGCCGCGGTTAGTTTCTATTAATTATCAAGGTTCCCTTGGATCAATGAGTTCATTTGGTACATTATATAATCAAACTCCAAAAGTACCATCTCCTGTGGCCACCTGGAGTGGCAGTCTTTCCACCCACCATTCTCAGCCTTACAAAAGGAATTTATTCTTGCAAAGTTTATATGAGGATGAGCAGAGACAATTAACTGGTACAGACAACAGACTTGCCGATTCGCAGGATGAAAATCAAGACAGGGACATTGTGCAATGTTTGGAAAATGACGTGCAATTCTGGACTGACTTCTCGAAAGTCCATTATCATCCACAGAGCTTATATGAATTGAGTGGGTTATGGATGGATGTTCAGAACTTTAATAATTATGGCATTGGGAAGGATGTTTTTTCTGAAGGTTTTCGGGGAGAGGATATGAATGACAGGATTCGTTTTTTCATGGAAGAGTGTGATCATATACAGGGAATTCAATTTGTACTGGATGATTCAGGGGGGTTTTCCAGCGTTGCGGCAGATTTTTTGCAAAATATTGTAGATGACTACACCAATGTTCCTTTATTGCTTTATACTGTTCGTGATCCTGGTTCTTATATGAATTCTAGAAGTCAAAAAAGGAACATCTCCAGGGATCTTCATGATGCAGTTTCTTTTGCAAGACTATCTCCATTCTGCAAGTTGATTGTACCTGTTGGTTTACCCTTTCTTGATTGCAAAGCTTCTCCATATCTGTGTGTTAATGATGAGAAGCTGTACCATTCCAGCGCTGTCTATGCTGCTGCCCTTCACTCCCTGAGTTTACCTAGTCGCATGGACATACTGGGGCCCACTGCAATGTCGGATTCCATTGCTGGTGCCTTGGATATCAATGGCCTTGTACAAATGCTATCAGGTCAACATCGACAGAACACGGTTGCCATATTGGATGCTACCATGCCAGCACCTTCGCTTACTGGGAAACAAGCTGATCAACCATTATTGAGTAATATGCAGCCATTGACACCAGAATTATCAGAAGAAATAGAGGATATGCAGTCTGTGGAGACATTGGTTATACATGGAGCTTTAGAGCCAGGAGGGAAACGAGCATCGGTCTCAGAGGTCCAACAGACAGTTGCTGCTGCATATGGAGTAACAATGACAAGGCCTAGATTCTATCACCTATCTGTGGCAACTTGTCCTCTCCCAATACCCTTGCCATTTCCTTCGATATTTGCGGATGTTGTTGGGCAACGGGGTGAGCTACTTGATACCCGGACACCAGATTCTGTTGCAAAGGGTTCTCTTGATGTCCATTCCATCCCTATGGCTGCAAGACTGCGGTCCAGCAGTGCTATCTTGCCATTCTTGTCGAAGAGGCTGGAAAACCTTCAGAAATTCGGTATTCGACGAGGTGCATTGGGTGGAGAATTGCTCAGAGGGTGGGGTTTTGGAAAGGAGGAACTAGAAGATATGGGAGAGACTCTCTCTAATATGGTGAAGTCTCTTGATCCTTTCTCCGATGAATTGTCTGATTCAGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_29979.p1 GENE.S_Transcript_29979~~S_Transcript_29979.p1 ORF type:complete len:571 (+),score=116.55,Misat_Tub_SegII|PF10644.5|4.8e-32,Tubulin_3|PF14881.2|1.4e-25 S_Transcript_29979:437-2149(+)
MREVLTVQVGTFANFIGSHFWNFQDELLGLAGDPESDLAFKNHGLNMDVLYRTGETQEGFLTYTPRLVSINYQGSLGSMSSFGTLYNQTPKVPSPVATWSGSLSTHHSQPYKRNLFLQSLYEDEQRQLTGTDNRLADSQDENQDRDIVQCLENDVQFWTDFSKVHYHPQSLYELSGLWMDVQNFNNYGIGKDVFSEGFRGEDMNDRIRFFMEECDHIQGIQFVLDDSGGFSSVAADFLQNIVDDYTNVPLLLYTVRDPGSYMNSRSQKRNISRDLHDAVSFARLSPFCKLIVPVGLPFLDCKASPYLCVNDEKLYHSSAVYAAALHSLSLPSRMDILGPTAMSDSIAGALDINGLVQMLSGQHRQNTVAILDATMPAPSLTGKQADQPLLSNMQPLTPELSEEIEDMQSVETLVIHGALEPGGKRASVSEVQQTVAAAYGVTMTRPRFYHLSVATCPLPIPLPFPSIFADVVGQRGELLDTRTPDSVAKGSLDVHSIPMAARLRSSSAILPFLSKRLENLQKFGIRRGALGGELLRGWGFGKEELEDMGETLSNMVKSLDPFSDELSDSD*

Click here to download the sequence:
Link to NCBI Protein BLAST