Transcript Information: S_Transcript_29981.p3


Annotated TAIR IDAT4G37190.1
Annotated Gene NameLOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta tubulin, autoregulation binding site (InterPro:IPR013838), Misato Segment II, myosin-like (InterPro:IPR019605), Tubulin/FtsZ, N-terminal (InterPro:IPR019746); Has 345 Blast hits to 341 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 140; Plants - 55; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17507155-17509512 | Forward length=562
E-Value8.6E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.529872550669
Replicate 25.3983421257749
Replicate 34.9049830009576
Condition 2: 8 Hour
Replicate 16.8059756331275
Replicate 210.47192915051
Replicate 38.6170447764818
Condition 3: 24 Hour
Replicate 17.4365560819044
Replicate 25.545400704851
Replicate 38.8545475039237


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_29981.p3 GENE.S_Transcript_29981~~S_Transcript_29981.p3 ORF type:complete len:94 (+),score=15.13,Misat_Tub_SegII|PF10644.5|5.3e-24 S_Transcript_29981:857-1138(+)
ATGAGAGAAGTACTCACTGTTCAAGTTGGAACTTTTGCCAATTTCATTGGTTCTCACTTTTGGAACTTCCAGGATGAATTACTTGGTTTGGCTGGTGATCCCGAGAGTGATCTTGCATTCAAGAATCATGGCTTAAACATGGATGTGCTGTATCGTACAGGAGAAACTCAGGAGGGGTTTCTTACTTATACGCCGCGGTTAGTTTCAATTAATTATCAAGAGATCATCCTTACTTTGTATACTGTTGAAATGCTCTCAAGTGAAAATCATCATCAACTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_29981.p3 GENE.S_Transcript_29981~~S_Transcript_29981.p3 ORF type:complete len:94 (+),score=15.13,Misat_Tub_SegII|PF10644.5|5.3e-24 S_Transcript_29981:857-1138(+)
MREVLTVQVGTFANFIGSHFWNFQDELLGLAGDPESDLAFKNHGLNMDVLYRTGETQEGFLTYTPRLVSINYQEIILTLYTVEMLSSENHHQL*

Click here to download the sequence:
Link to NCBI Protein BLAST