Transcript Information: S_Transcript_299849.p1


Annotated TAIR IDAT1G06820.1
Annotated Gene Namecarotenoid isomerase
Annotated Gene Symbol(s)CRTISO, CCR2
Annotation TypeOrtholog
Chromosome Positionchr1:2093145-2096220 | Reverse length=595
E-Value1.3E-119
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8145228114896
Replicate 22.4068497699107
Replicate 32.5149185568546
Condition 2: 8 Hour
Replicate 13.3926757322712
Replicate 24.0676088435867
Replicate 34.7476206029277
Condition 3: 24 Hour
Replicate 11.8866035741877
Replicate 21.4422425548585
Replicate 33.0954327224461


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_299849.p1 GENE.S_Transcript_299849~~S_Transcript_299849.p1 ORF type:5prime_partial len:220 (-),score=47.50 S_Transcript_299849:165-824(-)
ATCAACTATCCTATTGGCGGTGTTGGTGGAATTCCTAAATCCCTTGCCCAAGGTTTGGTTGATCATGGGAGCAAAATACTTTACAAAGCTAATGTGACTAAAATCATTATGGATCAAGGGAAAGCTGTTGGGGTGAAGCTGTCTGATGGAAGGAAATTTTATGCCAGAACGATCATATCAAATGCAACTAGATGGGATACTTTTGGAAAGCTTTTGAAAGATGAGAAGCTCCCGAAAGAAGAGGAAAATTTTCAGAAATTATATGTCAAGGCTCCATCTTTTCTTTCTATACACATGGGGGTCAAAGCTGAGGTGTTGCCACTAGATACAGATTGCCACCATTTTATTCTGGAGACTGACTGGAATAATTTAGAAGAGCCTTATGGTAGTATATTTTTGAGCATTCCCACCGTACTTGATTCTTCATTGGCCCCTGAAGGACACCATATTCTCCACATATTTACAACGTCTTCTATTGATGACTGGCAGGGATTGTCTCCAGAAGACTACAGGACAAAGAAGGAACTTATAGCTGATGAAATCATAAGCAGATTAGAGAAGAAAATGTTTCCAGAGCTTAAATCTTCCATCATTCTTAAGGAGTTATTGGAACAAACTAGTTGGTTTTTGCAAACAATTGAATTTGTGCATTGGATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_299849.p1 GENE.S_Transcript_299849~~S_Transcript_299849.p1 ORF type:5prime_partial len:220 (-),score=47.50 S_Transcript_299849:165-824(-)
INYPIGGVGGIPKSLAQGLVDHGSKILYKANVTKIIMDQGKAVGVKLSDGRKFYARTIISNATRWDTFGKLLKDEKLPKEEENFQKLYVKAPSFLSIHMGVKAEVLPLDTDCHHFILETDWNNLEEPYGSIFLSIPTVLDSSLAPEGHHILHIFTTSSIDDWQGLSPEDYRTKKELIADEIISRLEKKMFPELKSSIILKELLEQTSWFLQTIEFVHWM*

Click here to download the sequence:
Link to NCBI Protein BLAST