Transcript Information: S_Transcript_300181.p1


Annotated TAIR IDAT4G31880.1
Annotated Gene NameLOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1); Has 137162 Blast hits to 70781 proteins in 2973 species: Archae - 289; Bacteria - 24182; Metazoa - 56725; Fungi - 20130; Plants - 6559; Viruses - 758; Other Eukaryotes - 28519 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:15419435-15423939 | Reverse length=873
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21462097770307
Replicate 20
Replicate 30.14873174260968
Condition 2: 8 Hour
Replicate 10
Replicate 20.18041813419134
Replicate 30
Condition 3: 24 Hour
Replicate 10.35233683049345
Replicate 20.1827726740028
Replicate 30.40680716782445


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_300181.p1 GENE.S_Transcript_300181~~S_Transcript_300181.p1 ORF type:complete len:124 (+),score=13.34 S_Transcript_300181:708-1079(+)
ATGTCCCCCCTTCATTGCAGAGCTTTCAGTCTCCCCGCGCTAGACTGTCCAGTAGGCGGCTTCTTACCAGAGTGCCTGTGTGATTTGGACTCTGGAATTGCAGTATCTTCCGCCTTCTGTGAACAAATTTTATCAGCAGCGGTTTCGCGCATTGACGGGAAGGATGCATTGGCAGGTTCCTTATCTGATGTCTTTCGTAAGGAAACTGGAGGGCTAGAATCTTTCTCACATTCAGAAGATTCTGCAGCATCAGCCACAGGATTCTCACTTAGAGCACTGTCAACATCCTTGCCATCTTTTTCTTGGGGGTCAGACACCTTAACTGTGCCCTTATTATCATCTGTCTGCTATAACCTGATCATAATGTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_300181.p1 GENE.S_Transcript_300181~~S_Transcript_300181.p1 ORF type:complete len:124 (+),score=13.34 S_Transcript_300181:708-1079(+)
MSPLHCRAFSLPALDCPVGGFLPECLCDLDSGIAVSSAFCEQILSAAVSRIDGKDALAGSLSDVFRKETGGLESFSHSEDSAASATGFSLRALSTSLPSFSWGSDTLTVPLLSSVCYNLIIMS*

Click here to download the sequence:
Link to NCBI Protein BLAST