Transcript Information: S_Transcript_300243.p1


Annotated TAIR IDAT1G30860.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:10986696-10989246 | Reverse length=730
E-Value6E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3828926738835
Replicate 21.7069363745421
Replicate 31.2990841814084
Condition 2: 8 Hour
Replicate 12.26551490667
Replicate 22.4283530856054
Replicate 32.9044688422492
Condition 3: 24 Hour
Replicate 11.9171029391284
Replicate 21.805777134836
Replicate 31.2523647914781


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_300243.p1 GENE.S_Transcript_300243~~S_Transcript_300243.p1 ORF type:complete len:866 (+),score=169.17,zf-C3HC4_3|PF13920.2|2.5e-11 S_Transcript_300243:407-3004(+)
ATGAAGATGGCGTCCTCCCAAGTGGAGATCGCATCATCGTCACCCTTCGGCTGCGTGCTGAGAGACCACAACAGCAGGCGGGATAGACGGAGGGTCGACCCGAACCCGTCCCCAAACCCGAAATCCCAAACCAATTTTCAGAGGAATCTCAAGGAACTTGTCAGAGATCATCTCCATTCTTGCATTTCCATAACCCCTAGAGCTTCAAATCCAGAACCCGACGAAAATACTCCCCAACACCAGCACCACCATCACCATCAGAGGAACCACCAGGAATCAAGCGACAGATGGGCGGCTGAGAAGGCGAAGGAGATGGTCAGGACGATTGAGAGTTTTTCGACAACAAAGACCGAGCCCTCAATGAGGAGGAGAGACCCTTCTCCCACGCCATCTGACACCTCATCAAATGATCTGAGCGTTTCTTCTCTTGTTCAGAAATGGCGTGGGTTTGAGGCCGAAGCCAAGCCTAAAAAACAACATAGTAACAATATAATTACCACAAATAATGTTAATGTGAACGTGAATGTGAATGTCAGTGTTAATAATGTGGAGGTAAGCAGAGCAAGTTCAGGGGTGTCCATATGCGAGTCAACGGTAACGAATGCCACAATGGAGGACCGAGATGGAGGAGAAGGAGAGAGAGAGAGGATAGAAGAGAGAGAGGAGGCTGAAGCAGAAGCTCCATCGAGCTCGGTTGTTGGTAATATTGGAAGGGAAAGAGAAAGGATGAGGGTAGCCGACATTGTGAGAAAATGGGCTAGTGATGAACATGATGAAGCACCCTTTGGAGCAAGTTTGGCGAGGCTGAGAATTGGGAAGGAATCATTTGGAGGAGCAGAGCAAAGTCAAAGAGTATTCTTCTCTCCTCATGTTGTGGTTTGTTCTCCTCGTATTAGAGGAAGGCAAGCTATTGCTGATTTGTTTATGAGAATGGAGAGAGAGAGGTATAATGAGGTGGAGTCCTTAGCTTCTCGTCATGCTGTTTCTAAATTCCCTCAGCGTGGTAGAATTCAGTCGTTGCTTCGGCTGAGATTTCTACGACGGGAACTGGCGGTGCTGCCTAGTTCAGAATCCAAAGCGACTGGATCAAACCGGCCTCAGACGGCTTCATCTATTACCAGTCTAAGGGAGAAATTCAGTACCACAGCTGAGCAAGATTCAACTAACACGCGAAACACTTACAATAATAGCTCAAAATCGAAGCAAGACACCATTGAAGGCACAAGTAATTCCCATAAGCCCTCTGAGAGAATCAATCGTCAAGACGACCAGAACAATATTCAAAGCTCTAGTACAGAGACGACGAACGACAATGGACCCACAACATCAAGTTCCTCGTCCAGTCAGGTGGCAGAACAACCAACAACCACTATTCCTCAGCAGGAAAACAACATTGAGAGCTCAGTGCAGCAGAATCCGATGGATGTCTTTCGAGAGGATGTTCCTTCTTCAGATGCTATATGGGAAGATGCCAGCGATGAAGATGTTGGTAACCTTGACATGGAAGGGGCAGGAGACACAGCCACATCATATAACGATTGGGAAGATGAAGAAGAGATAATGTCAGAAGACCAAGAATTCAGCAGTCAGCAGTACTTCGAGAGTAACCTTGACTGGATTAGTGACATTGCTCGCCCACGTAGCTACTGGGAAGATTGCAGGCAAGCTAGGTATCAGGAAGTGTTAAACACTAAGTCCAAAGATGAGGAGATAAGGCAGCTTCTTGAAAGGGGAAGTGTGTCAGCAGTTCTAGCTAGTGACTTTCGGGACAGAATGGACCGTTTGGTAATGTGTAGTGTGCAAAGAGTAATGCATCCAACTTCCCTTGAAATAGAGGAAGAGGACAGATCAATGTCAGCCTTCTTGGAACTGTGTACCCCGTCATTCAATCATCAGTCGGAAGATGAGCAAAACGACCAGGAACATGTACAGGAGAACACAGAGGGTGCTGGACAAGAAGTTGGGGACAAAGAGGATGACGAGGAAGAAAATGACCGAACAGAAGAGGAAGAAGAAGAAGTCAGGTTGAGCATTCATCAATATCATGATGGTGGTGACTATTATGATCAAACTCCATCTTCATTGCAAATTCCTTGGCATCATCATTACCAGGATCATGAAGCTAATTATGATTCAGATCATGGTGCTTCTACAACTTTGCAACAACCTTCACCAGCTCCTTCTTATGACCATGACACCCACGGAGGTTCATCATTCAAGAATTCATCAATTGAAATGGAACTAATTTATGATTTAAGAACCCATATGGTGCAACTTTATCGCGAGATGTCTGAGCTGCGAAAATCAATTACAAGCTGCATGGATATGCAAATGAAGTTGCAACATTCAATCAGGGAAGAAATTTCAGCTGCCGTGAATCATACAGAGCGAGTTGATGCAAAGGATTCAAATAGAAGGCAGCCAAAGAAAGGTTGCTGTTGCATTTGTTATGAGAAGAAAGTTGATTCACTTCTTTACAGATGTGGGCATATGTGCACCTGTTTCAAATGTGCCCACGAATTGCAGTGGAGTAGCGGGAAATGTCCAATTTGCCGAGCTCAGATAGTTGACGTAGTACGAGCATACGCTGACACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_300243.p1 GENE.S_Transcript_300243~~S_Transcript_300243.p1 ORF type:complete len:866 (+),score=169.17,zf-C3HC4_3|PF13920.2|2.5e-11 S_Transcript_300243:407-3004(+)
MKMASSQVEIASSSPFGCVLRDHNSRRDRRRVDPNPSPNPKSQTNFQRNLKELVRDHLHSCISITPRASNPEPDENTPQHQHHHHHQRNHQESSDRWAAEKAKEMVRTIESFSTTKTEPSMRRRDPSPTPSDTSSNDLSVSSLVQKWRGFEAEAKPKKQHSNNIITTNNVNVNVNVNVSVNNVEVSRASSGVSICESTVTNATMEDRDGGEGERERIEEREEAEAEAPSSSVVGNIGRERERMRVADIVRKWASDEHDEAPFGASLARLRIGKESFGGAEQSQRVFFSPHVVVCSPRIRGRQAIADLFMRMERERYNEVESLASRHAVSKFPQRGRIQSLLRLRFLRRELAVLPSSESKATGSNRPQTASSITSLREKFSTTAEQDSTNTRNTYNNSSKSKQDTIEGTSNSHKPSERINRQDDQNNIQSSSTETTNDNGPTTSSSSSSQVAEQPTTTIPQQENNIESSVQQNPMDVFREDVPSSDAIWEDASDEDVGNLDMEGAGDTATSYNDWEDEEEIMSEDQEFSSQQYFESNLDWISDIARPRSYWEDCRQARYQEVLNTKSKDEEIRQLLERGSVSAVLASDFRDRMDRLVMCSVQRVMHPTSLEIEEEDRSMSAFLELCTPSFNHQSEDEQNDQEHVQENTEGAGQEVGDKEDDEEENDRTEEEEEEVRLSIHQYHDGGDYYDQTPSSLQIPWHHHYQDHEANYDSDHGASTTLQQPSPAPSYDHDTHGGSSFKNSSIEMELIYDLRTHMVQLYREMSELRKSITSCMDMQMKLQHSIREEISAAVNHTERVDAKDSNRRQPKKGCCCICYEKKVDSLLYRCGHMCTCFKCAHELQWSSGKCPICRAQIVDVVRAYADT*

Click here to download the sequence:
Link to NCBI Protein BLAST