Transcript Information: S_Transcript_30028.p1


Annotated TAIR IDAT1G78230.1
Annotated Gene NameOuter arm dynein light chain 1 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29430226-29432516 | Forward length=681
E-Value6.6E-148
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.535279105935
Replicate 237.175162751535
Replicate 335.046528829386
Condition 2: 8 Hour
Replicate 118.767576160598
Replicate 217.425471700596
Replicate 314.600739544452
Condition 3: 24 Hour
Replicate 133.71435775716
Replicate 229.541557863967
Replicate 331.126627054869


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_30028.p1 GENE.S_Transcript_30028~~S_Transcript_30028.p1 ORF type:complete len:692 (+),score=162.59,LRR_8|PF13855.2|1.3e-10,LRR_8|PF13855.2|4.2e-08,LRR_8|PF13855.2|4.4,LRR_8|PF13855.2|7.2e+02,LRR_4|PF12799.3|0.00011,LRR_4|PF12799.3|1.1e-06,LRR_4|PF12799.3|0.2,LRR_9|PF14580.2|1.2e-07,LRR_9|PF14580.2|4.5e+02,LRR_1|PF00560.29|3.6,LRR_1|PF00560.29|2.5e+02,LRR_1|PF00560.29|4.2,LRR_1|PF00560.29|2.5e+02,LRR_1|PF00560.29|11 S_Transcript_30028:694-2769(+)
ATGACTTTGTTCAGTTGCTTCCCCAGTCTTGTTGGAAGGAAGAAGAAAGGAAAGGGTGATGTGAAGTCTACACCTGATGTTAAGGACACCAATGGACTTAGAACTCTGCAAGTGAAGCTGGAACACCCAGTGAAATCTGCTGAACTTGTTGAGGTGAACTCCACCTCATTTAGTGTTCCGGTCCCGTACGATATCCCCGAGAACTCTAGCTGCAAGGTGAAGGTGCTGAACCCTGAGACTGAGAGTCCTGTTGACAGGGAAGTAGTAGAGGGTGCATATGAAGGCGAAGATGAGCGTGACGGTGACGATAATAAGTCATCACCAATTAGGAGGGATAACTCTGATTGTGACCTTCAAGCATCTGACATTCACTCTTGTAAGACTGGTTTTCAATTTGGAAACAATGATATCAATGTCATACCCATTGACCCCTTTCCACAAAGGGTCAATAAGCATTCTGGGGACAAGGAAGCAAACGACGAGGCGATTGACTTGATGATCCAAAGTGGGCATGTGAGTGACCCTGGGAGGGCAACAGTTGAGAGGTGGGCTTCACCGAGGCTGAAACATTCATGCTCGAGCCTGGACACGAGGGAAGTGCTTAAGAAGATAGCCGATCAGTTTCCACCTTCAAAGTGTCAGTCCTTTGAAGAGTTGCGAGAATTAGTCAAAAAAGCAGAGGAGGATGCTTTCTTGCGGTCTCCTTGCAGTCAGTCGTCTGCTCTCTCGCAACGCAGTGCTGATAAGGTGATGTTGAAGAAGCATTCCTCGAGCCAGATTCTGCCTTCGAGGAGCAGGAGATTGTGGTGGAAGCTGTACCTGTGGAGCCACAGGAACTTGCAGAAGCCTACTGGTGCTAAAGACAGGGTTTCTGTGCTTGCTTCCCTTAATCAGCAAGGTGGATACTCATCAGACACACTTGAAGCTGGTCGAGTCAAGCAGCTCAACAAACTTAAATCACCTGCATCGTTTTCTGAAACATGCAGTTACAAAAGCAGTGACAAGGACAACGATGAAGCCCAGAGATGGGATGGATTTAAGGGTGGAGTGTCAGGTTTCTGGCCCCAGAATCAGTGGGTAGCTTTCTCTGGGGAGTCTTCTTCCCTGAAGAGGGTCGATGACTGGGTCAAGGATCTTGATATTCAGTCCACAACTCCGTCCATTGAAGGCGAAAACGGCAACAAAGACATTGTCTTTCCACCCTCTCCTGAGGCCCCTGGGCTTTTGGCGAAAGGCGCTACCCATTTGTCACGGCATAACAAAATCAATCTGTCAGAGGAGCTTTTGCATGCCAATAGTGTGGTTCAGTCTTTGAATGCCTCCTCAACTGTGGCTCATATTGCAGGGATGAGCTTGAAGGTTGTACCTATGATCTCACAGTTCTCAAGCCTCCGGTCTGTCAATTTATCGAACAACTCTATAGTTCAAATTACTCCTGGATCACTTCCCAAGGGTCTTCATGTCCTTGACTTGTCTAGGAACAAGATCAGTGCCATTGAAGGGCTTAGAGAGCTAACTCGATTGCGTGTGCTTGATCTGAGCTACAATAGAATCTCTCGAATTGGGCATGGACTTGGAAACTGCACATTGCTCAAGGAGTTGTATCTTGCTGGCAACAAAATCAGTGAAGTTGAGGGGCTGCACAGGCTGCTGAAGCTTACAGTCTTGGACCTTAGCTTCAACAAGCTTACCACAACGAAAGCTTTGGGTCAGCTCGTTGCCAACTACAATTCGTTACTTGCTCTAAATCTGTTGGGCAATGCAATACAGAGCAACCTAAGTGAGGACCAGCTTCGCAAGGCCATCTGTGGACTTCTCCCAAAGCTAGCGTTGCTGAACAAGCAGCCTGTCAATCAACAGAAAGCCCGAGAGGTTTCAATGGATATTGTTGCCAAAGCTTCATCTCGAAGCAGCAGCTGGAATGCACACAGGAGACCAGCAAAGAAGGGAAGTCAAGGTGGAGCACTGCCGTCCAGTTCTGTAAGGGGCAAGATCAATGCCATCACTACACAAAGAAGCAGAAGCAAGTTGAAAAGTCGAACTAGTCGCCACTTAGGCTCGCAGATGAGGACATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_30028.p1 GENE.S_Transcript_30028~~S_Transcript_30028.p1 ORF type:complete len:692 (+),score=162.59,LRR_8|PF13855.2|1.3e-10,LRR_8|PF13855.2|4.2e-08,LRR_8|PF13855.2|4.4,LRR_8|PF13855.2|7.2e+02,LRR_4|PF12799.3|0.00011,LRR_4|PF12799.3|1.1e-06,LRR_4|PF12799.3|0.2,LRR_9|PF14580.2|1.2e-07,LRR_9|PF14580.2|4.5e+02,LRR_1|PF00560.29|3.6,LRR_1|PF00560.29|2.5e+02,LRR_1|PF00560.29|4.2,LRR_1|PF00560.29|2.5e+02,LRR_1|PF00560.29|11 S_Transcript_30028:694-2769(+)
MTLFSCFPSLVGRKKKGKGDVKSTPDVKDTNGLRTLQVKLEHPVKSAELVEVNSTSFSVPVPYDIPENSSCKVKVLNPETESPVDREVVEGAYEGEDERDGDDNKSSPIRRDNSDCDLQASDIHSCKTGFQFGNNDINVIPIDPFPQRVNKHSGDKEANDEAIDLMIQSGHVSDPGRATVERWASPRLKHSCSSLDTREVLKKIADQFPPSKCQSFEELRELVKKAEEDAFLRSPCSQSSALSQRSADKVMLKKHSSSQILPSRSRRLWWKLYLWSHRNLQKPTGAKDRVSVLASLNQQGGYSSDTLEAGRVKQLNKLKSPASFSETCSYKSSDKDNDEAQRWDGFKGGVSGFWPQNQWVAFSGESSSLKRVDDWVKDLDIQSTTPSIEGENGNKDIVFPPSPEAPGLLAKGATHLSRHNKINLSEELLHANSVVQSLNASSTVAHIAGMSLKVVPMISQFSSLRSVNLSNNSIVQITPGSLPKGLHVLDLSRNKISAIEGLRELTRLRVLDLSYNRISRIGHGLGNCTLLKELYLAGNKISEVEGLHRLLKLTVLDLSFNKLTTTKALGQLVANYNSLLALNLLGNAIQSNLSEDQLRKAICGLLPKLALLNKQPVNQQKAREVSMDIVAKASSRSSSWNAHRRPAKKGSQGGALPSSSVRGKINAITTQRSRSKLKSRTSRHLGSQMRT*

Click here to download the sequence:
Link to NCBI Protein BLAST