Transcript Information: S_Transcript_300430.p1


Annotated TAIR IDAT3G58730.1
Annotated Gene Namevacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:21718495-21719280 | Reverse length=261
E-Value1.9E-111
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.290575527375
Replicate 220.478169313052
Replicate 317.321906818851
Condition 2: 8 Hour
Replicate 128.748039985527
Replicate 222.001044518626
Replicate 327.439737524644
Condition 3: 24 Hour
Replicate 118.344874533538
Replicate 218.281306575396
Replicate 322.853123107398


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_300430.p1 GENE.S_Transcript_300430~~S_Transcript_300430.p1 ORF type:3prime_partial len:181 (-),score=46.98,ATP-synt_D|PF01813.13|1.1e-54 S_Transcript_300430:3-542(-)
ATGTCAGGGCAAAGCCAGCGTTTAAATGTTGTACCAACTGTCACAATGCTCGGTGTGATGAAAGCTCGTCTTGTTGGTGCAACGAGAGGACATGCCCTCTTGAAGAAGAAAAGTGATGCATTGACTGTGCAGTTCCGTCAAATCCTCAAGAATATTGTATCCACAAAGGAATCAATGGGGGATGTAATGAAGACATCTTCCTTTTCCTTAACTGAAGCCAAATATGTTGCTGGTGAAAATGTTAAACACGTTGTCCTTGAGAATGTGAAAAGTGCTTCCCTTAAGGTTCGCTCTAGGCAAGAAAATGTTGCCGGGGTCAAGCTCCCCAAGTTTGAGCACTTCAGTGAGGGAGAGACTAAAAATGATCTCACTGGATTGGCTAGAGGTGGCCAGCAAGTGCAGCAGTGTCGTACTGCTTATGTGAAAGCCATAGAGGTTCTTGTTGAGCTTGCTTCTCTTCAAACTTCGTTTTTGACTCTTGATGAGGCTATCAAGACTACAAACCGCAGGGTGAATGCCTTAGAGAATGTCATGAAACCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_300430.p1 GENE.S_Transcript_300430~~S_Transcript_300430.p1 ORF type:3prime_partial len:181 (-),score=46.98,ATP-synt_D|PF01813.13|1.1e-54 S_Transcript_300430:3-542(-)
MSGQSQRLNVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRQILKNIVSTKESMGDVMKTSSFSLTEAKYVAGENVKHVVLENVKSASLKVRSRQENVAGVKLPKFEHFSEGETKNDLTGLARGGQQVQQCRTAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVMKP

Click here to download the sequence:
Link to NCBI Protein BLAST