Transcript Information: S_Transcript_300586.p1


Annotated TAIR IDAT5G20620.1
Annotated Gene Nameubiquitin 4
Annotated Gene Symbol(s)UBQ4
Annotation TypeHomolog
Chromosome Positionchr5:6973315-6974463 | Reverse length=382
E-Value8E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.99991045103279
Replicate 21.2115404670312
Replicate 32.2387136286452
Condition 2: 8 Hour
Replicate 11.3559496733437
Replicate 21.0991948753623
Replicate 31.4169494072675
Condition 3: 24 Hour
Replicate 11.6415230368655
Replicate 22.1615774046805
Replicate 30.87475298514853


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_300586.p1 GENE.S_Transcript_300586~~S_Transcript_300586.p1 ORF type:complete len:346 (+),score=65.97,ubiquitin|PF00240.19|5.7e-16,ubiquitin|PF00240.19|1.5e-06,ubiquitin|PF00240.19|3.8e-07,ubiquitin|PF00240.19|3.1e-10,Rad60-SLD|PF11976.4|2.5e-08,Rad60-SLD|PF11976.4|4.2e-05,Rad60-SLD|PF11976.4|4.1e-05,Rad60-SLD|PF11976.4|0.2,Rad60-SLD_2|PF13881.2|45,Rad60-SLD_2|PF13881.2|2.2,Rad60-SLD_2|PF13881.2|0.4 S_Transcript_300586:58-1038(+)
ATGGCAGCAGCACCTTCAATCAACGTATCTGGTTCTCAGAGAAGAAGCTCTGTCCATGATGATGAGATTCACATATTCCTGAAGGTCAGAAACATTTTTCACTTCAAAGCAAGGAAATCTCAAACAATTAAGAAGCTGAAAGAGATGATTTGCAGCAAGGAAGGTGTTTCCGAGAGCCTGCAGGACCTGTACTATGCAGGAGATCATCTGGAGGATGAGCAAACACTTGCTGTCTGTGGCATCGAGAGAAACTCTACCGTGGATCTTGTTCTGCACACCTCGTCTGTGTTTGCACGAAAACTACTCATCAAAATACCAGCCACCCAACAAACTGTTGTGGTCATGGCAGAGGTTCATGACACCGTTCAGAAAGTCAAATCTATTGTTCGCTCCAAGGAGGGAATACCAGAATCCGAAGATTTCAACCTGATGCATGACGGGAAATTTCTTGAAACCTACAAAACTCTTGCATCTCTCGCCATAGGCAATGATTCGACATTTTACTTGGTGTATCATCCTAAAGATGTGCAGTCTATATCTGTGCTTGTACCTACGCAGGAAATCATAGACTTGCAAGTCAAGCAGTTGCAAAAAATTGGTGATGTGAAAGCTTTGCTCGGAAGCATGACTGATACATCATTTGAAGACGTGAAGTTTGTGTATGCAGGAAAAGCTCTAGACGAGTCAAGGACATTTTCTTCGTATAAGTTGAAAGAGAATGCCTTAATAGAAGTCGCGTATTCTATCCAGCTTTTTGTGGAACTTTGGAGCGGGAAAAGTACTGTTGTGCTTGATGTGCTCCCTTCAGACACCATTGCAGATGTGAATTTGAAGGTTTTCAAAATACTGCAGTTGCCTCCGAGTACTCAGTCTTATTTCTTTGCTGGTAAAAAGCTGACTGAGCATCGAAGTTTAGAAAGTTACAGCATCCAGAAAAGCTACACTCTTCAAATGGCACGTCCTTGGGAAGATTATCGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_300586.p1 GENE.S_Transcript_300586~~S_Transcript_300586.p1 ORF type:complete len:346 (+),score=65.97,ubiquitin|PF00240.19|5.7e-16,ubiquitin|PF00240.19|1.5e-06,ubiquitin|PF00240.19|3.8e-07,ubiquitin|PF00240.19|3.1e-10,Rad60-SLD|PF11976.4|2.5e-08,Rad60-SLD|PF11976.4|4.2e-05,Rad60-SLD|PF11976.4|4.1e-05,Rad60-SLD|PF11976.4|0.2,Rad60-SLD_2|PF13881.2|45,Rad60-SLD_2|PF13881.2|2.2,Rad60-SLD_2|PF13881.2|0.4 S_Transcript_300586:58-1038(+)
MAAAPSINVSGSQRRSSVHDDEIHIFLKVRNIFHFKARKSQTIKKLKEMICSKEGVSESLQDLYYAGDHLEDEQTLAVCGIERNSTVDLVLHTSSVFARKLLIKIPATQQTVVVMAEVHDTVQKVKSIVRSKEGIPESEDFNLMHDGKFLETYKTLASLAIGNDSTFYLVYHPKDVQSISVLVPTQEIIDLQVKQLQKIGDVKALLGSMTDTSFEDVKFVYAGKALDESRTFSSYKLKENALIEVAYSIQLFVELWSGKSTVVLDVLPSDTIADVNLKVFKILQLPPSTQSYFFAGKKLTEHRSLESYSIQKSYTLQMARPWEDYR*

Click here to download the sequence:
Link to NCBI Protein BLAST