Transcript Information: S_Transcript_300611.p1


Annotated TAIR IDAT3G09510.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2921804-2923258 | Forward length=484
E-Value1.2E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.09212020692073
Replicate 30
Condition 2: 8 Hour
Replicate 10.1335619435311
Replicate 20.09341064150199
Replicate 30
Condition 3: 24 Hour
Replicate 10.04560518474028
Replicate 20.047314846714713
Replicate 30.10531125012575


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_300611.p1 GENE.S_Transcript_300611~~S_Transcript_300611.p1 ORF type:complete len:479 (-),score=70.67,RVT_3|PF13456.2|4.2e+03,RVT_3|PF13456.2|1.7e-22,zf-RVT|PF13966.2|1.6e-18,zf-RVT|PF13966.2|1.6e+04 S_Transcript_300611:121-1557(-)
ATGAAGGCACGTTATTATGCTGATGGCAATATTTTGGACTCTACATTGGGACCAAGACCAAGCTATATATGGAGAAGTCTTCATGGTGTTCAGAAGGTGTTAACAATGGGAATGAGGTGGGTTATTGGGAATGGTTCTTCTGTTAAGGTTTGGTGTGATCCCTGGCTGCCACGCCCAACAAGCTTCAAACCCATTGTCAACTCTACTGGTGCTACAGAGGACTTGAAGGTGGAAGAGCTTATTGATAGGGAGCTGGGAAAGTGGAAGGAAGAGCTAATAAGGGAGTTGTTTTTACAGGTTGATGCTGACATGATTCTCAATCTACCACTATGTCAGTTTTGGCCAGAGGATCGTTTAATATGGCACTACACCACTACGGGAAGCTTCACAGTTCGCTCGGCCTACCATATGATTATGGAGCATCGACGACAAAATGATCCGCATTCGAGCGACTCTTCTCAAAAACCCTTTTGGAAGAAGCTTTGGTCCCTTGACATCCCACCGCGCATTAAAAACTTTGCTTGGAGAGCCATTTCGAATGCCCTCCCTACAAATTTCAACATTGCCAGAAGAGTGCAATCGGGAGAAATGGGTTGCTCCTTCTGCGGAGCTATGGAGGACACAAGTCTCCATGCCTTGATGGAATGCCCTTGGGCGCAATTGGCGTGGGAACAGAGTGGTTGGAAGCATGAGTATTGGTCGGGCAGGTTCATCTCGGTACTGGACTGGTGGGATTTTGCAAGATTCGATGGACGAATGGAGGACTGGGGAGCTTTTCTTGCTGCTGCCTGGGCAATCTGGTGCGAGAGGTGTAAGCTTCTTTATGAAGCGGACCACGAACAGGGGCTGCACATCTGTGAAAATGCTCGAAAATTCGTGGCAAACTTCAGAGCCGCTCGTGCAAAGGAAGACGTACATAGTGTGAGCTCGGTCACTTGGTGGAGGCCACCATCCTCGGGGACCTGGAAGCTTAATGTCGATGCAGGTTGCTTAGGAGACTGGGGGTGTGGCTGGGGGGCTGTGATAAGGGATGCTACTGGTGATGTTGTGGCGCTGGGGGTACATCAGAAACAAGGACAATTTGATCCAGAAATTGAAGAGGCGAGAGCTGTGCTTTTCGGAGTGCAAATGGCGTGGGATGCGGGATACCGAAATTTAGTGGTGGAGAGCGACTGCTTGAGTATCATTTCCAAACTACAGAAGAAACAACAGCTACTTTCTTCTCTTGGCTTTATCCTTGATGAAGTTATAAAATGCGCCAGTAATTTTGATTTTATTTCTTGGTCTCATATACGTAGGGAGGGCAACTCTGTTGCTCATAATCTAGCTAGACACCAACCGTATGCGTTTGGTGATAGATATTGGTTGGATGATATGCCAGATGTTTTTCTTGATTATGCCGGCAAAGATATGTGTAACTATCTAGCTAATCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_300611.p1 GENE.S_Transcript_300611~~S_Transcript_300611.p1 ORF type:complete len:479 (-),score=70.67,RVT_3|PF13456.2|4.2e+03,RVT_3|PF13456.2|1.7e-22,zf-RVT|PF13966.2|1.6e-18,zf-RVT|PF13966.2|1.6e+04 S_Transcript_300611:121-1557(-)
MKARYYADGNILDSTLGPRPSYIWRSLHGVQKVLTMGMRWVIGNGSSVKVWCDPWLPRPTSFKPIVNSTGATEDLKVEELIDRELGKWKEELIRELFLQVDADMILNLPLCQFWPEDRLIWHYTTTGSFTVRSAYHMIMEHRRQNDPHSSDSSQKPFWKKLWSLDIPPRIKNFAWRAISNALPTNFNIARRVQSGEMGCSFCGAMEDTSLHALMECPWAQLAWEQSGWKHEYWSGRFISVLDWWDFARFDGRMEDWGAFLAAAWAIWCERCKLLYEADHEQGLHICENARKFVANFRAARAKEDVHSVSSVTWWRPPSSGTWKLNVDAGCLGDWGCGWGAVIRDATGDVVALGVHQKQGQFDPEIEEARAVLFGVQMAWDAGYRNLVVESDCLSIISKLQKKQQLLSSLGFILDEVIKCASNFDFISWSHIRREGNSVAHNLARHQPYAFGDRYWLDDMPDVFLDYAGKDMCNYLANQ*

Click here to download the sequence:
Link to NCBI Protein BLAST