Transcript Information: S_Transcript_30106.p1


Annotated TAIR IDAT3G54250.1
Annotated Gene NameGHMP kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20082468-20084688 | Reverse length=419
E-Value8E-242
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.251250438916
Replicate 218.446797919822
Replicate 318.35512213546
Condition 2: 8 Hour
Replicate 117.982217488319
Replicate 218.280085349325
Replicate 318.277959585269
Condition 3: 24 Hour
Replicate 113.179573412378
Replicate 215.288651989745
Replicate 315.756289022673


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_30106.p1 GENE.S_Transcript_30106~~S_Transcript_30106.p1 ORF type:complete len:421 (+),score=105.09,GHMP_kinases_N|PF00288.22|1.9e-07 S_Transcript_30106:478-1740(+)
ATGCCGGGGGAGAAAAATTGGGTGAGAATGGCGACAGCTCAAACCCCAACCAATATAGCAGTAATAAAGTATTGGGGAAAGAGAGATGAAACCCTAATTTTGCCGATTAATGATAGTATTAGTGTAACCCTTGATCCTGATCATCTCTGTACTACTACTACTGTTGCTGTTAGTCCTAACTTTGACCAAGATCGAATGTGGCTTAATGGCAAGGAGATTTCTCTGGCTGGAGGAAGATATCAGAATTGTCTTAGAGAAATCCGTAAACGTGCTAGTGATGTTGAAGAGGAAGAGAAGGGTATAAAAATAGCTAAGAAGGATTGGGAAAACTTGCATGTGCATATTGCTTCCTACAATAATTTCCCTACCGCTGCGGGTTTGGCTTCTTCAGCTGCTGGTTTTGCTTGCCTTGTTTTTGCTCTTGCGAAGCTCATGAACCTGAAAGAAGATCAAGGAATGCTTTCTGCCATAGCAAGGCAAGGTTCAGGCAGTGCATGTCGTAGTTTATTTGGCGGTTTTGTTAAGTGGATTATGGGAAATAATGAAGACGGAAGCGATAGTTTAGCCATTCAGCTTGTTGATGAGAAGCACTGGGATGAGCTTGTCATTTTGATTGCTGTGGTAAGTTCTCGTCAAAAAGAAACAAGCAGTACCAGTGGGATGCGTGAGAGTGTTGAAACAAGCTTGCTCCTAAAGCACAGGGCAGAGGAAATAGTACCAAAGCGTACACTTTTGATGGAAGAAGCCATAAAAAATAAAGATTTCTCCTCTTTTGCTCATTTGACTTGCGCTGATAGTAATCAGTTTCATGCTGTTTGTCTGGACACGTCCCCGCCAATATTCTACATGAATGACACATCCCACAAGATTATAAGCACTGTGGAGAGGTCAAATCGTGCTGAAGGAGAAGCTCAGGTGGCTTATACTTTTGATGCCGGACCGAATGCTGTCCTAATTGCTCGCAACAGGAAAGCTGCTGCTCTTCTTCTACAGAAGCTGCTTTTCTACTTCCCCCCAGCAGCTGGTACTGATTTGAACAGTTATGTTCTTGGAGATAAGTCCATACTTCAAGATGCTGGAATCAAAGATATGAAGGATGTGGAAAGTTTGCCACCTCCTACAGAATTGAAGGAAGGCAATTCGGTCGAGAAGAATGCAGGAGCTGTTAGCTATTTCATATGTACAAGACCGGGACAGGGACCAGGTCTTCTTTCTGATGAAAGTCAGGCTCTTCTTAACCCAGACACAGGACTGCCAAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_30106.p1 GENE.S_Transcript_30106~~S_Transcript_30106.p1 ORF type:complete len:421 (+),score=105.09,GHMP_kinases_N|PF00288.22|1.9e-07 S_Transcript_30106:478-1740(+)
MPGEKNWVRMATAQTPTNIAVIKYWGKRDETLILPINDSISVTLDPDHLCTTTTVAVSPNFDQDRMWLNGKEISLAGGRYQNCLREIRKRASDVEEEEKGIKIAKKDWENLHVHIASYNNFPTAAGLASSAAGFACLVFALAKLMNLKEDQGMLSAIARQGSGSACRSLFGGFVKWIMGNNEDGSDSLAIQLVDEKHWDELVILIAVVSSRQKETSSTSGMRESVETSLLLKHRAEEIVPKRTLLMEEAIKNKDFSSFAHLTCADSNQFHAVCLDTSPPIFYMNDTSHKIISTVERSNRAEGEAQVAYTFDAGPNAVLIARNRKAAALLLQKLLFYFPPAAGTDLNSYVLGDKSILQDAGIKDMKDVESLPPPTELKEGNSVEKNAGAVSYFICTRPGQGPGLLSDESQALLNPDTGLPK*

Click here to download the sequence:
Link to NCBI Protein BLAST