Transcript Information: S_Transcript_30122.p1


Annotated TAIR IDAT5G50410.1
Annotated Gene Nameunknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20528446-20529816 | Reverse length=259
E-Value2E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1941731323478
Replicate 21.6971376582704
Replicate 31.0640040048231
Condition 2: 8 Hour
Replicate 11.9138170797427
Replicate 22.2945485784335
Replicate 30.40992014624964
Condition 3: 24 Hour
Replicate 10.84018782656131
Replicate 23.1961785556387
Replicate 33.7186347520363


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_30122.p1 GENE.S_Transcript_30122~~S_Transcript_30122.p1 ORF type:3prime_partial len:156 (+),score=30.23 S_Transcript_30122:343-807(+)
ATGGTGGAGGAGGAGGGAGTGACAACGGGAAACAATAATGGCGAAGAATGGGAGACTAGGGCTAAAGAATGGCTATCAACTTTACCCAAAGATCAAGCCTTGAGCATGACCCAAGTTGAGACTTGGGTTCAATCTAATTTACCCGACTCTATCAAAACCCTTCCTCAATCTCAACTTCTTCGCCGTTTTAGCTCTTTGCATGCCTCTCTCCATTCTCAACCTCAGGAGGTAAAGCAAGCTAATCGTGGTGAGAATCCTGCTCGTTTTCAACGAACTGATCAATGGCGTCCAGTTTATGATTGGTTAGAGTCATTGGACTTGGATGAGGTTCTCAAGTCCAAAGACATTTCTGACTGGCTGGCTGCAAATCCTGAGGTATATGATCAATTGTGCTCAAGACATTCTCGCTATCATTTGATGCACTATATAAAAAAATGCCATGTCAAGATTCTGAAGAAACGAAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_30122.p1 GENE.S_Transcript_30122~~S_Transcript_30122.p1 ORF type:3prime_partial len:156 (+),score=30.23 S_Transcript_30122:343-807(+)
MVEEEGVTTGNNNGEEWETRAKEWLSTLPKDQALSMTQVETWVQSNLPDSIKTLPQSQLLRRFSSLHASLHSQPQEVKQANRGENPARFQRTDQWRPVYDWLESLDLDEVLKSKDISDWLAANPEVYDQLCSRHSRYHLMHYIKKCHVKILKKRK

Click here to download the sequence:
Link to NCBI Protein BLAST