Transcript Information: S_Transcript_301415.p3


Annotated TAIR IDAT4G37445.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT1G64850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17604144-17604918 | Reverse length=161
E-Value1.3E-59
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.4833771250236
Replicate 21.8481917953939
Replicate 31.6415000702681
Condition 2: 8 Hour
Replicate 13.1262352297368
Replicate 23.1625126349352
Replicate 33.6828427799182
Condition 3: 24 Hour
Replicate 12.287422355036
Replicate 22.4918326864047
Replicate 34.0936302437623


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_301415.p3 GENE.S_Transcript_301415~~S_Transcript_301415.p3 ORF type:complete len:191 (+),score=41.37 S_Transcript_301415:1850-2422(+)
ATGGGTCTCATTCCTAGCTTCATGGGTAGAGGTCTGCCCAAAAAGCAGATGTTGAGCCTGGTTATGGGAGCACTCTATAGCGGTTTTGTGAAGGAAGACATCACCAGCTTTGAGAAGTTCCACGTAGCAATCATCGACATCTTTGCCACTATCAATTCAGCACTGCCTGGGAAACATTACGACGTTCCATCTCGCCATGAAGTAGAGGAGTGGTACAAGAAATGGATGGAAGCCGACGACAAAAAGCAAGTGTTTGTGGAGTTTATGAAGAACAATGTAAAAGGCAGCAAGCTGGATGACTCAACATTAGTCACAGGGTTGTTGACACCACCAGCAGCCATGGCAGTGAAGAAAACTGGAGAGAACATACCACAGCTTAAGTTCATCAAAGTTGTTCCGGATGTTCTCTTTGTCCCATCAGCGACAGTCTTAGTTCTCATGTCAGTCAAGATTTCAAGGAAACTGTTCTTCAGCAAGATGGCTGAACATGAGCATCAAGATGACGAACTGACTCAACATGATCAGTTAGATGAGCATGATCATTTAGACCAACATCTTCAAAAACGAGCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_301415.p3 GENE.S_Transcript_301415~~S_Transcript_301415.p3 ORF type:complete len:191 (+),score=41.37 S_Transcript_301415:1850-2422(+)
MGLIPSFMGRGLPKKQMLSLVMGALYSGFVKEDITSFEKFHVAIIDIFATINSALPGKHYDVPSRHEVEEWYKKWMEADDKKQVFVEFMKNNVKGSKLDDSTLVTGLLTPPAAMAVKKTGENIPQLKFIKVVPDVLFVPSATVLVLMSVKISRKLFFSKMAEHEHQDDELTQHDQLDEHDHLDQHLQKRA*

Click here to download the sequence:
Link to NCBI Protein BLAST