Transcript Information: S_Transcript_301509.p1


Annotated TAIR IDAT5G01790.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:305057-305683 | Reverse length=208
E-Value4E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.661300123518
Replicate 22.3981292997299
Replicate 30.80185809059133
Condition 2: 8 Hour
Replicate 11.4835054133658
Replicate 21.0699579784217
Replicate 31.1121311793903
Condition 3: 24 Hour
Replicate 11.424666314604
Replicate 23.3503025808513
Replicate 32.3028823152497


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_301509.p1 GENE.S_Transcript_301509~~S_Transcript_301509.p1 ORF type:complete len:230 (+),score=48.14 S_Transcript_301509:170-859(+)
ATGCCTAGCAGCAGCAGCAGCAACAACAAAGGAGTTTCAATGAAGAAGGAAAAGGGAGTTTCCAAAGCAAAGTTACTATTGTCAGAGAAAAACAGGGGAGTTGAAGCAGGGGAAACCTCATTTAGGGTGTATTATGGGGAAACAGGTGCAGCTGTGCCTTTCATGTGGGAATCACAACCAGGTACACCTAAGCACCCTATTTTTAACCATGACCATCATCATGATATTCTCCCTCCTCTTACTCCCCCTCCTTCCTACAACTCATCGATTATCCCCTCACCTTTTAGGAAGAGTCGAGGAAAGCCGAGGATTAATTTCTCGGCTTTCTTCTCATCCATTATTGCAAAAAGGAGGAGTAGTAGCTCTAACTTAACCCCAACTTCGGTTTTGTCTTCTTCCTCTTACTCGGGCCCACTTTCGTGGTCTCGATCCTCCTCCAGCTCTTCTTCTGCCTCTTCCCCTAAGAGGAAGAAGCACAACAGGTCCCACTCCAGGAGCCTTTCGTTATGCTCTCCCTCCAGAGCTAACAAATTCCTTCTTTTTGATGATGACGAGCATGAGGATGTGGGTGGATCTCCTTCTCATACCACTACTACTAGTTCAACAATGATGTGCTTTGGGTTTAAGAATCAAGGGTGTTACTCAATGCAAGATATGAAAAATGCACTTTTGTCCATTAAAGGGCATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_301509.p1 GENE.S_Transcript_301509~~S_Transcript_301509.p1 ORF type:complete len:230 (+),score=48.14 S_Transcript_301509:170-859(+)
MPSSSSSNNKGVSMKKEKGVSKAKLLLSEKNRGVEAGETSFRVYYGETGAAVPFMWESQPGTPKHPIFNHDHHHDILPPLTPPPSYNSSIIPSPFRKSRGKPRINFSAFFSSIIAKRRSSSSNLTPTSVLSSSSYSGPLSWSRSSSSSSSASSPKRKKHNRSHSRSLSLCSPSRANKFLLFDDDEHEDVGGSPSHTTTTSSTMMCFGFKNQGCYSMQDMKNALLSIKGH*

Click here to download the sequence:
Link to NCBI Protein BLAST