Transcript Information: S_Transcript_301512.p1


Annotated TAIR IDAT5G01790.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:305057-305683 | Reverse length=208
E-Value2E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0324009099855
Replicate 22.1872593095812
Replicate 32.0668583541966
Condition 2: 8 Hour
Replicate 11.5626363594451
Replicate 21.9286076413557
Replicate 31.2863011485765
Condition 3: 24 Hour
Replicate 11.6948616501323
Replicate 21.6607103310255
Replicate 32.6091770074258


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_301512.p1 GENE.S_Transcript_301512~~S_Transcript_301512.p1 ORF type:complete len:232 (+),score=46.49 S_Transcript_301512:170-865(+)
ATGCCTAGCAGCAGCAGCAGCAACAACAAAGGAGTTTCAATGAAGAAGGAAAAGGGAGTTTCCAAAGCAAAGTTACTATTGTCAGAGAAAAACAGGGGAGTTGAAGCAGGGGAAACCTCATTTAGGGTGTATTATGGGGAAACAGGTGCAGCTGTGCCTTTCATGTGGGAATCACAACCAGGTACACCTAAGCACCCTATTTTTAACCATGACCATCATCATGATATTCTCCCTCCTCTTACTCCCCCTCCTTCCTACAACTCGTCTTCCTCGATTATCCCCTCACCTTCTAGGAAGAGTAGAGGAAAGCCGGGGATTAATTTCTCGGCTTTCCTCTCATCCATTATTGCAAAAAGGAGTAACAGTAGTTCTAACTTAACCCCATCTTCGGTTTTGTCTTCTTCCTCTTACTCGGGCCCACTTTCGTGGTCTCGATCCTCCTCCAGCTCTTCTTCTGCCTCTTCCCCTAGGAGGAAGAAGCACAACGGGTCCCACTCGAGGAGCCTTTCGCTATGCTCTTCCTCTAAAGCTAACAAATTCCCCCTTTTTGATGATGATGGGCATGAGGATGTGGGTGGATCTTCTTCTCATACCACTACTACCAGTTCAACAATGATGTGCTTTGGGTTTAAGAATCAAGGGTGTTACTCAATGAAAGATATGAAAAATGCACTCTTGTCTATTAAAGGGCATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_301512.p1 GENE.S_Transcript_301512~~S_Transcript_301512.p1 ORF type:complete len:232 (+),score=46.49 S_Transcript_301512:170-865(+)
MPSSSSSNNKGVSMKKEKGVSKAKLLLSEKNRGVEAGETSFRVYYGETGAAVPFMWESQPGTPKHPIFNHDHHHDILPPLTPPPSYNSSSSIIPSPSRKSRGKPGINFSAFLSSIIAKRSNSSSNLTPSSVLSSSSYSGPLSWSRSSSSSSSASSPRRKKHNGSHSRSLSLCSSSKANKFPLFDDDGHEDVGGSSSHTTTTSSTMMCFGFKNQGCYSMKDMKNALLSIKGH*

Click here to download the sequence:
Link to NCBI Protein BLAST