Transcript Information: S_Transcript_30154.p1


Annotated TAIR IDAT5G51300.1
Annotated Gene Namesplicing factor-related
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20849881-20852295 | Reverse length=804
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 135.013482866984
Replicate 236.818885548763
Replicate 338.316991138761
Condition 2: 8 Hour
Replicate 146.954481655576
Replicate 247.087966024366
Replicate 342.300789425668
Condition 3: 24 Hour
Replicate 134.590087183037
Replicate 233.42399119927
Replicate 332.563519167278


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_30154.p1 GENE.S_Transcript_30154~~S_Transcript_30154.p1 ORF type:complete len:773 (+),score=206.42,SF1-HH|PF16275.1|1.6e+04,SF1-HH|PF16275.1|1.1e-28,RRM_1|PF00076.18|9e-20,RRM_5|PF13893.2|5.5e-10,RRM_6|PF14259.2|5.9e-08,KH_1|PF00013.25|1.4e-06,KH_3|PF13014.2|1.9e-05 S_Transcript_30154:81-2399(+)
ATGGAAGAAGCTCAAAATCTCTCTGAAAACTTCCCCATTTCTTTCCCTCAAAAACCTCTCCAAACCCTAGTTTCGTACGACCATGACGACGATTCCAATTCCAATCCAAATCCACCACAAACCCTAACTCCTCCTCAAGATCCTCAAACCCTAGATCACAACTACAACAACAACAATTCACATAATCACCACCAAAACGGAAACCCTAACGATTCCAACGTTCCTCCTCGAAGCGAATCTCTACCTCGTAGCGAATCCGTTCCTCGCAGCGACACTCCGAACAACAACCAATCCGGCGGCGAGGAGGAGACGACGAGCCGCCGTAAGCGACGAAGCCGCTGGGACCCACCTCCGTCATCCGAAACCACCACCACCGAAGGCGCCACCGGAGACGGAGGATCCACTACCGGAGGAGGGAGGAAGAGGAAGTCAAGGTGGGCGGACGACGAGCCGAAGCCGGTGATACAGCTCCCGGATTTCATGGGAGGTATTGAATTCGATCCCGAAGTTCAAGCGTTGAATAGTAGATTACTTGAAATAAGTAGGAAATTACAATCTGGAATGCCATTAGATGATAGACCCGAAGGAGCTAGGTCTCCGTCCCCGGAACCGATTTATGATAACATGGGAATTAGGATTAATACTCGTGAATATCGTGCTCGTGAGAAATTGAATCGAGAAAGACAAGAGATTATCTCTCAGATTATTAAAAAGAATCCTGCATTTAAGCCACCTGCTGATTATAGACCCCCGAAGCTTCAAAAGAAGCTTTATATTCCTCAAAAGGAGTTCCCTGGTTACAATTTTATTGGGCTCATTATTGGGCCGAGGGGGAATACTCAGAAGAGGATGGAGAAGGAGACGGGGGCGAAGATTGTGATTCGAGGGAAAGGGTCTGTTAAGGAAGGGAGGTTGCAACAAAAACAGAATTTGAAGCCTGACCCTTCTGAGAATGAGGATTTGCATGTTTTGGTTGAGGCTGATACTCAGGAATCGCTCGAGGGGGCTGCTGCTATGGTGGAGAAGTTGTTGCAGCCTGTTGATGAGGTTTTGAATGAGCATAAGAGGCAGCAGTTGAGGGAGTTGGCTGCGTTGAATGGGACTATTAGGGATGAGGAGTATTGTAGGTTGTGTGGTGAGCCGGGCCATAGGCAGTATGCTTGTCCTTCAAGGACTACAACATTTAAGAGTGATGTTTTGTGTAAGATATGTGGGGATGGTGGTCATCCAACGATTGATTGTCCTGTGAAAGGGACTACTGGGAAGAAGATGGATGATGAGTATAGGAACTTTTTGGCTGAGTTGGGTGGTACCGTGCCTGAATCGGTGGCGAAGTCGGAGGATTCTTCGGCCCCGAGTGGTGGTGGTGGTGGTAGTGGAAGTAATCCTCCTTGGCAGAGTGGAAGTGGTGGTGGTGCTGCTGTTGGAGGAACTCATGCTGGTTTGGGATCAAGTTTGATTAAGCCAAAAGAGTATGATGAGACGAACTTGTACATTGGGTACTTGCCACCTACACTTGATGATGATGGTTTGATTCGTCTGTTTTCGCCTTTTGGTGAGATTGTGATGGCTAAGGTGATCAAGGATCGGGTTACTCAGCTAAGCAAAGGGTATGGGTTCGTTAAGTACTCTAATGTTGAACAGGCTAACACTGCCATTGCCAGTATGAACGGGTATCGTTTAGATGGCCGGACCATTGCTGTTAGGGTTGCTGGGAAACCCCCTCAACCACCAACTGGCCCTCAGCCTCCTCAAGCTCCTTCAATGCCGCCATACCCGGCTGCGAATCAAGGTCCTCCTGGGGCTTACCCATCACAGCAATTCACAACTGGTGGTCCTCTTGGTGGGGCTCCAGTTCCTTGGGGAGCTCCTCCAGTTCCTCCAACTCCTTATGGTGGTGGTGCTTATCCTCCACCTCCACCACCGGGGTCGAATTATTATCCCCCACCACCATCATATGGTGTGCAGTATCCTCCTCCTCCAAGTGGTGTCTCGTCGCAACAGACTGCGCCTATTCCTCCTGGTGATGCACAACAACCAAATTACCTTCCACCAGGAGTGCAATCCCAGCCACCTGCTAGTTCTACCGCTTCTTCAGTGGCACCAGCTGCTCAGCCTGCTACTTACTTGCCTTCGTCTTATGGGTATGCGCCGCCTTATTATGGAGTTCCACCACCAGCCCCACCTCCTACTGATCAACTGCCACAAAGCATGGCAAATGTCCCTTGGGCCTCAAACCCACCGGCTCCTGCTGCAGAGAAGACAACAACACAGGGAGCTGATGCAGAGTACGAGAAGTTCATGGCAGAGATGAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_30154.p1 GENE.S_Transcript_30154~~S_Transcript_30154.p1 ORF type:complete len:773 (+),score=206.42,SF1-HH|PF16275.1|1.6e+04,SF1-HH|PF16275.1|1.1e-28,RRM_1|PF00076.18|9e-20,RRM_5|PF13893.2|5.5e-10,RRM_6|PF14259.2|5.9e-08,KH_1|PF00013.25|1.4e-06,KH_3|PF13014.2|1.9e-05 S_Transcript_30154:81-2399(+)
MEEAQNLSENFPISFPQKPLQTLVSYDHDDDSNSNPNPPQTLTPPQDPQTLDHNYNNNNSHNHHQNGNPNDSNVPPRSESLPRSESVPRSDTPNNNQSGGEEETTSRRKRRSRWDPPPSSETTTTEGATGDGGSTTGGGRKRKSRWADDEPKPVIQLPDFMGGIEFDPEVQALNSRLLEISRKLQSGMPLDDRPEGARSPSPEPIYDNMGIRINTREYRAREKLNRERQEIISQIIKKNPAFKPPADYRPPKLQKKLYIPQKEFPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQQKQNLKPDPSENEDLHVLVEADTQESLEGAAAMVEKLLQPVDEVLNEHKRQQLRELAALNGTIRDEEYCRLCGEPGHRQYACPSRTTTFKSDVLCKICGDGGHPTIDCPVKGTTGKKMDDEYRNFLAELGGTVPESVAKSEDSSAPSGGGGGSGSNPPWQSGSGGGAAVGGTHAGLGSSLIKPKEYDETNLYIGYLPPTLDDDGLIRLFSPFGEIVMAKVIKDRVTQLSKGYGFVKYSNVEQANTAIASMNGYRLDGRTIAVRVAGKPPQPPTGPQPPQAPSMPPYPAANQGPPGAYPSQQFTTGGPLGGAPVPWGAPPVPPTPYGGGAYPPPPPPGSNYYPPPPSYGVQYPPPPSGVSSQQTAPIPPGDAQQPNYLPPGVQSQPPASSTASSVAPAAQPATYLPSSYGYAPPYYGVPPPAPPPTDQLPQSMANVPWASNPPAPAAEKTTTQGADAEYEKFMAEMK*

Click here to download the sequence:
Link to NCBI Protein BLAST