Transcript Information: S_Transcript_301698.p1


Annotated TAIR IDAT4G24840.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein transport, Golgi organization; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: COG complex component, COG2 (InterPro:IPR009316); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:12796525-12800926 | Reverse length=756
E-Value2.9E-57
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2465520523204
Replicate 21.7191784070791
Replicate 30.95806421213509
Condition 2: 8 Hour
Replicate 12.2156249680138
Replicate 21.3074456997243
Replicate 31.6609751380505
Condition 3: 24 Hour
Replicate 12.4114481775331
Replicate 20.88300564583172
Replicate 30.98267705474478


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_301698.p1 GENE.S_Transcript_301698~~S_Transcript_301698.p1 ORF type:internal len:154 (-),score=13.05,COG2|PF06148.7|8.9e-30 S_Transcript_301698:1-459(-)
CAACCCCAGTCCTACACCACCTCCTCCACCTCCACCTCCACCTCCACCACCACCCGAGATAGATCAACAATGGCGTCCCCAGATCTAGCCCCACCACCACCCCCGCGAACCCCAACAGACCTATTCGGGGACCCAATTGACGACTCAAACCCATTATGGTTCAAGAAGGACCTCTTTCTCTCTCCAGATTTCGACCCGGAATCCTACATTTCGGACCTCCGTACCTTCGTCCCTTTCGAAACTCTCCGATCGCAGCTCCAATCTCACCTCTCCTCTCTCAAACACGAGCTCGTCGATCTAATCAATCGCGATTACAATGACTTCGTCAATCTCAGCACCAAGCTTGTCGACGTGGATTCTGCTGTTGCTCGTATGCGGGCCCCATTGTCGGATCTCAGAGAAAAGATTCTCGCTTTTAGGGTTTCTGTTGAGAGTTCTTTGGTTTCTATTAAGGAGGGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_301698.p1 GENE.S_Transcript_301698~~S_Transcript_301698.p1 ORF type:internal len:154 (-),score=13.05,COG2|PF06148.7|8.9e-30 S_Transcript_301698:1-459(-)
QPQSYTTSSTSTSTSTTTRDRSTMASPDLAPPPPPRTPTDLFGDPIDDSNPLWFKKDLFLSPDFDPESYISDLRTFVPFETLRSQLQSHLSSLKHELVDLINRDYNDFVNLSTKLVDVDSAVARMRAPLSDLREKILAFRVSVESSLVSIKEG

Click here to download the sequence:
Link to NCBI Protein BLAST