Transcript Information: S_Transcript_301768.p1


Annotated TAIR IDAT2G39440.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit C (InterPro:IPR013924); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:16468220-16469113 | Reverse length=162
E-Value0.0005
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0931574005198
Replicate 23.4705511663506
Replicate 33.3155480599731
Condition 2: 8 Hour
Replicate 12.6357223987468
Replicate 24.2732744592736
Replicate 32.3950390567395
Condition 3: 24 Hour
Replicate 14.1726181948326
Replicate 23.3104443875564
Replicate 32.5505438162477


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_301768.p1 GENE.S_Transcript_301768~~S_Transcript_301768.p1 ORF type:5prime_partial len:89 (+),score=4.93 S_Transcript_301768:3-269(+)
GGGATTAAGGTGGATGGCTTAGCAGTAGAGGAAGCTTTCTTTAGTAGGAAATTAGAGGGCGTTACAGTTCCGTTGCCTGAGGGATATTCTGGTAATGTTCTCTGTCAATCTCTTTTAATTTTATGCATTTGCTGTTATGCATTTTTTAATGGCAAAAACTTGAATGAACTCGGTTTATATAATAGACCTAGAGATGTCACCCCCTTTCCATATTCATTTGTTGTCAAGAGAATTACCCTTAATTGGATGCTACTTCATTGTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_301768.p1 GENE.S_Transcript_301768~~S_Transcript_301768.p1 ORF type:5prime_partial len:89 (+),score=4.93 S_Transcript_301768:3-269(+)
GIKVDGLAVEEAFFSRKLEGVTVPLPEGYSGNVLCQSLLILCICCYAFFNGKNLNELGLYNRPRDVTPFPYSFVVKRITLNWMLLHCS*

Click here to download the sequence:
Link to NCBI Protein BLAST