Transcript Information: S_Transcript_301847.p1


Annotated TAIR IDAT1G52620.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19603828-19606287 | Forward length=819
E-Value9E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.90726140574479
Replicate 20.50142703539806
Replicate 30.4191530928091
Condition 2: 8 Hour
Replicate 10.96933592350605
Replicate 21.525353316345
Replicate 30.72667662289709
Condition 3: 24 Hour
Replicate 10.99294924957246
Replicate 20.77262994010275
Replicate 30.28661414096723


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_301847.p1 GENE.S_Transcript_301847~~S_Transcript_301847.p1 ORF type:internal len:88 (-),score=18.53,PPR_2|PF13041.2|0.077,PPR_2|PF13041.2|1.6e-07,PPR_2|PF13041.2|4.4e-09,PPR_1|PF12854.3|4.3e+02,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|4.9e-11,PPR|PF01535.16|6.3,PPR|PF01535.16|9.7,PPR|PF01535.16|2.6e-06,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|0.00063 S_Transcript_301847:2-262(-)
CGGGAGGTTGATAAACTTTTGGAGGAGATGAAGATGAGGGGTTTGAGGATCAATGTTCAGATTTATAATAATATAGCTGATGCCAAGATTAAACACGGTTGTGCAGTTGAACCTTTTGAGACGATAAGAAAACTCAAGGAGAATGACTGTAAGCCAGATATCATGACATACAACACCTTAATTTCTGGTTCATGTTCTAGAGGGAAAATAGAGGAAGCTCATATTCTTCTTGAGCAAGCTATAAAGAGGGGTTTGAAACCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_301847.p1 GENE.S_Transcript_301847~~S_Transcript_301847.p1 ORF type:internal len:88 (-),score=18.53,PPR_2|PF13041.2|0.077,PPR_2|PF13041.2|1.6e-07,PPR_2|PF13041.2|4.4e-09,PPR_1|PF12854.3|4.3e+02,PPR_1|PF12854.3|1.8e+02,PPR_1|PF12854.3|4.9e-11,PPR|PF01535.16|6.3,PPR|PF01535.16|9.7,PPR|PF01535.16|2.6e-06,PPR_3|PF13812.2|1.8e+02,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|0.00063 S_Transcript_301847:2-262(-)
REVDKLLEEMKMRGLRINVQIYNNIADAKIKHGCAVEPFETIRKLKENDCKPDIMTYNTLISGSCSRGKIEEAHILLEQAIKRGLKP

Click here to download the sequence:
Link to NCBI Protein BLAST