Transcript Information: S_Transcript_302014.p1


Annotated TAIR IDAT5G09790.2
Annotated Gene NameARABIDOPSIS TRITHORAX-RELATED PROTEIN 5
Annotated Gene Symbol(s)ATXR5, SDG15
Annotation TypeOrtholog
Chromosome Positionchr5:3039204-3040970 | Reverse length=379
E-Value5.9E-125
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3033789231356
Replicate 21.9715684285439
Replicate 32.6683107525209
Condition 2: 8 Hour
Replicate 12.9038829368011
Replicate 22.7607813214982
Replicate 32.2676433622321
Condition 3: 24 Hour
Replicate 13.7182780409522
Replicate 24.5327623152695
Replicate 32.7905240618426


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_302014.p1 GENE.S_Transcript_302014~~S_Transcript_302014.p1 ORF type:5prime_partial len:235 (+),score=41.39,SET|PF00856.24|1.5e-06 S_Transcript_302014:3-707(+)
TCGAAAAAGCGTCGAAGAAGACCTGGCACGTTGATTTGTTACAAGAAGAAAAAGAGAAGATTGCTTCCATTCATCCCTACAGAAGATCCAGTTCGAAGGTTGGAACAAATGCGTTCCCTTGCTACAGCTTTAACCACGCTAAAGATGGAATTCAGTAATGAACTGACTTACATGTCTGACATGGCTCCAAGGGCTGCTAATCAGGCAAAATTTGAGGATGGAGGAATGCAGGTGCTCTCAAAAGAAGATCATGAAACCGTGGAGCAATGCAGATCTATGGCTAGAAGAGGCAAATGTCCACCCCTAGTAGTAGTTTATGACTCACATGAAGGTTTCACAGTCGAGGCTGATGGCCCAATCAAGGATATGACATTCATTGGAGAATATGCTGGAGACGTGGATTACATCAAGAACCGGGAGCTTGATGACTGTGATAGTTTGATGACCCTCCTCCTTGCAACAGACCCATTGAAAAGTCTGGTCATTTGTCCTGACAAACGTGGAAATATTGCTCGCTTCATCAATGGCATCAACAACCACACACCGGAAAGTAGGAAGAAACAGAATCTTAAATGTGTGAGATATGATGTGGATGGTGAATGCCATGTTTTCCTAGTTGCCACCCGCGATATTGCCAAGGGAGAAAGGCTCTACTACGATTATAATGGATACGAGCATGAATACCCTACTCATCATTTTCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_302014.p1 GENE.S_Transcript_302014~~S_Transcript_302014.p1 ORF type:5prime_partial len:235 (+),score=41.39,SET|PF00856.24|1.5e-06 S_Transcript_302014:3-707(+)
SKKRRRRPGTLICYKKKKRRLLPFIPTEDPVRRLEQMRSLATALTTLKMEFSNELTYMSDMAPRAANQAKFEDGGMQVLSKEDHETVEQCRSMARRGKCPPLVVVYDSHEGFTVEADGPIKDMTFIGEYAGDVDYIKNRELDDCDSLMTLLLATDPLKSLVICPDKRGNIARFINGINNHTPESRKKQNLKCVRYDVDGECHVFLVATRDIAKGERLYYDYNGYEHEYPTHHFL*

Click here to download the sequence:
Link to NCBI Protein BLAST