Transcript Information: S_Transcript_302018.p1


Annotated TAIR IDAT5G09790.2
Annotated Gene NameARABIDOPSIS TRITHORAX-RELATED PROTEIN 5
Annotated Gene Symbol(s)ATXR5, SDG15
Annotation TypeHomolog
Chromosome Positionchr5:3039204-3040970 | Reverse length=379
E-Value5E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24871963771197
Replicate 20
Replicate 30.51708605841871
Condition 2: 8 Hour
Replicate 10.69755949635482
Replicate 20.52270674391885
Replicate 30.79685411607407
Condition 3: 24 Hour
Replicate 10.40831557926344
Replicate 20.21181132314343
Replicate 30.94288016467724


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_302018.p1 GENE.S_Transcript_302018~~S_Transcript_302018.p1 ORF type:3prime_partial len:214 (+),score=25.42,PHD|PF00628.25|5.4e-11 S_Transcript_302018:297-935(+)
ATGCCCCCATCCAGCTCGGCCCAGAAGCTGTACCCCTTCAATGGGACAGTTCACCGGACGGCAGCCACACCGCCTGAAAACACGCCGGTGAAAAAAGCAGCTCCGGTGAAAGCAAAGAAGTACAAAACAATGGAGGAAATAATGGCGAAAGCAAAGTATGCAGTGATCGAACGTGAGGATTACTCGGATGTCACGTGCGACGAATGTGGGTCAGGTGATAAACCACACGAGCTTCTCTTGTGTGATAAATGTGATCAAGGGTTTCATATGGGTTGTGTCCGACCCGTCGTTGTTCGGGTCCCTATCGGATCCTGGGTCTGCCCCAATTGCTCCGGTCAGCCACGTGTCAGAAGTTTTTCGCAGAAGAAGATAATAGACTTTTTTAGAATTCAGAAGTGTAAGGGTGTAACTGATGAAGGCTACTCTAGTTCTTCTTCTTCTCAAGATTCGAAAAAGCGTCGAAGAAGACCTGGCACGTTGATTTGTTACAAGAAGAAAAAGAGAAGATTGCTTCCATTCATCCCTACAGAAGATCCAGTTCGAAGGTTGGAACAAATGCGTTCCCTTGCTACAGCTTTAACCACGCTAAAGATGGAATTCAGTAATGAACTGACTTACATGTCTGACATGGCTCCAAGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_302018.p1 GENE.S_Transcript_302018~~S_Transcript_302018.p1 ORF type:3prime_partial len:214 (+),score=25.42,PHD|PF00628.25|5.4e-11 S_Transcript_302018:297-935(+)
MPPSSSAQKLYPFNGTVHRTAATPPENTPVKKAAPVKAKKYKTMEEIMAKAKYAVIEREDYSDVTCDECGSGDKPHELLLCDKCDQGFHMGCVRPVVVRVPIGSWVCPNCSGQPRVRSFSQKKIIDFFRIQKCKGVTDEGYSSSSSSQDSKKRRRRPGTLICYKKKKRRLLPFIPTEDPVRRLEQMRSLATALTTLKMEFSNELTYMSDMAPR

Click here to download the sequence:
Link to NCBI Protein BLAST