Transcript Information: S_Transcript_30208.p3


Annotated TAIR IDAT1G60900.1
Annotated Gene NameU2 snRNP auxilliary factor, large subunit, splicing factor
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:22424008-22427806 | Forward length=589
E-Value2E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.460549045218
Replicate 219.111715795045
Replicate 320.674659558686
Condition 2: 8 Hour
Replicate 134.229288916672
Replicate 235.908954504529
Replicate 334.621281141849
Condition 3: 24 Hour
Replicate 124.210253040531
Replicate 224.540432917064
Replicate 321.366445260385


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_30208.p3 GENE.S_Transcript_30208~~S_Transcript_30208.p3 ORF type:complete len:157 (+),score=41.25 S_Transcript_30208:1997-2467(+)
ATGACTCAACTATGCAGCAATGGACAGGCAAAATTAGAGCATGAAAATCTCTTAGCACAGGCACAACAACATGTAGCCATGCAGAAAATGGCTCTACAAGCTGGTGGCTTCAATCTTCTTGGGGTCTCTTTGCCACCTCTGGCGAGCACAGAAAATCCAACCAAGATTCTTTGCTTGAATCAGGTGGTGACTATTGATGAATTGAGAGATGATAATGAGTATGATGAAATCTTGGAAGACATGAGGGATGAATGTGGAAAATTTGGAGTCCTGGTGAGTGTTATTATTCCTCGGCCAAACATGGAGGGGGATCTGATTCCTGGAGTTGGAAAGGTGTTTTTGGAGTATTCGGATTCTTCTGCGTGCGCTAATGCAAAGAGCATGCTTGGAGGAAGAAAGTTTGGAGGCAACACCGTAACTGCTGACTACTATCCAGAAGAGAAATTCTACAGTGCTGATTACAGCGGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_30208.p3 GENE.S_Transcript_30208~~S_Transcript_30208.p3 ORF type:complete len:157 (+),score=41.25 S_Transcript_30208:1997-2467(+)
MTQLCSNGQAKLEHENLLAQAQQHVAMQKMALQAGGFNLLGVSLPPLASTENPTKILCLNQVVTIDELRDDNEYDEILEDMRDECGKFGVLVSVIIPRPNMEGDLIPGVGKVFLEYSDSSACANAKSMLGGRKFGGNTVTADYYPEEKFYSADYSG*

Click here to download the sequence:
Link to NCBI Protein BLAST